Lonchura striata domestica (Bengalese finch): 110484340
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Entry
110484340 CDS
T05897
Symbol
PRDM5
Name
(RefSeq) PR domain zinc finger protein 5
KO
K22534
PR domain zinc finger protein 5 [EC:2.1.1.-]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110484340 (PRDM5)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110484340 (PRDM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
PRDM2_PR
zf-met
zf-C2H2_11
zf-Di19
SET
zf-C2H2_8
zf-C2H2_5
Trm112p
zf-H2C2_5
zf-C2H2_3rep
zf-C2HC_2
zf_UBZ
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
110484340
NCBI-ProteinID:
XP_021410604
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Position
4:complement(7354658..7412860)
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AA seq
602 aa
AA seq
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MLGMYVPDRFALKSSRVQDGMGLYTARRVKKGEKFGPFAGEKRMPQELDESTDCRLMWEV
RGSKGEVLYILDASNPRHSNWLRFVHEAPSQEQKNLAAIQEGENIFYLAVEDIETDTELL
IGYLDSDMEEEEEEEEEVTVIQEDVDSGSNKEVQPSGEKIADPLTCKQDHACPNCESSFA
SQEILAEHLQTLHQKPSEEKEFKCRNCGKKFPVKQALQRHYEQHKEACRGDARFICKADS
CGKRFKSKDALKKHKENVHSGNSRKKLMCSVCNKKCSSAANLQEHRKVHEIFECQECDKK
FISANQLKRHMITHSEKRPYTCEVCNKSFKRLDQVTAHKIIHSEDKPYKCKLCGKGFAHR
NVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCDHCDATFKRKDTLN
VHIQVVHDGHKKYKCDLCDKAFVTPSVLKSHKKTHTGEKEKICPYCGQKFASNGTLRVHI
RSHTGERPYQCPYCDKAFSKNDGLKMHIRTHTREKPYQCSECNKAFSQKRGLDEHMRTHT
GEKPFQCDVCDLSFSLKKMLIRHKLTHNPNRPMAECQLCHKKFTRNDYLKVHMENVHGET
DS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatgtacgtgccggataggttcgccctgaagtcgtcccgggtgcaggacggg
atggggctctacacggcccgcagagtgaagaagggtgaaaagtttgggccctttgcaggg
gagaagcgaatgccgcaggagctggacgagagcacagactgcaggctcatgtgggaagtt
cgtgggagcaaaggtgaagtcctttatatcctggatgccagcaacccacgccattctaac
tggctgcgctttgtccatgaggctccgtcccaggaacagaagaacctggcagccatccag
gagggggaaaatattttctatctggctgtagaagatattgaaacagacacagagcttctg
attgggtacttggacagtgacatggaagaagaggaggaggaggaggaagaagtaactgtt
atccaggaagatgtagacagtggcagcaataaagaagtgcagccatctggtgaaaaaatt
gcagatcccctcacctgtaaacaggaccatgcatgcccaaactgtgaatccagttttgcc
agccaggagatcctagctgagcatctgcagactttgcaccaaaaacccagtgaggaaaag
gaatttaagtgccgaaattgtggaaagaaattccctgttaaacaagctctacaaagacat
tatgagcagcacaaggaggcgtgcagaggggatgccaggtttatatgcaaggcagatagc
tgtgggaagaggttcaagagcaaggatgccctgaaaaaacacaaagaaaatgttcacagt
ggaaattctaggaagaagctgatgtgttcagtgtgcaataagaaatgttcctcagcagca
aatctccaggagcatcgaaaggtccatgagatttttgaatgtcaagaatgtgataagaaa
ttcatttcggcaaaccagctgaagcgccatatgataactcattcagaaaaacgcccctac
acctgcgaggtttgcaataagtccttcaaacgacttgatcaagtgactgcacacaaaata
atacacagtgaagataaaccttataaatgcaagctttgtggaaagggatttgcccacaga
aatgtttacaagaatcacaagaagacccattctgaagagaggccgttccagtgtgaggaa
tgcaaagccttgttccgaacccctttctctctacaaagacatctgttaatccataacagt
gagaggaccttcaagtgtgatcactgtgatgccactttcaaaagaaaggacacattaaat
gttcatattcaagttgtacatgatggacataagaaatacaagtgtgacctgtgtgacaaa
gcttttgtgactccctcagttctgaagagccataagaaaactcacacaggagaaaaagag
aaaatttgcccatattgtggacagaagtttgcaagcaacggaacactgagagttcatatc
cgaagccatacaggtgagcgtccttaccagtgtccttactgtgacaaagctttcagcaag
aacgatggcttgaagatgcacattcgcacccacaccagggaaaagccgtaccagtgctcg
gagtgtaacaaggctttcagtcagaagagaggcctggatgagcacatgaggacccacacc
ggggagaagcccttccaatgtgatgtttgtgacctgtccttcagcctgaagaagatgctg
atccgacacaagctgactcacaaccccaaccgccccatggcagagtgccagctctgccac
aagaagtttacaaggaatgactacctcaaagtccacatggaaaatgtccatggagaaact
gacagctaa
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