Lonchura striata domestica (Bengalese finch): 110484557
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Entry
110484557 CDS
T05897
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110484557
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110484557
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
110484557
NCBI-ProteinID:
XP_021410982
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All DBs
Position
2:5490953..5523239
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AA seq
1935 aa
AA seq
DB search
MAEFLLPGTNNFRRFTQESLAAIKKRIDAKKNCQKNTTEQKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYKDHKVFIVLNKQKTIYRFTATRALWIFSPFHPIRRRAIK
ILILTLFTWFIMCTILTNCVFMSLTESSKTSSPSWNTYVEFTFTGIYTFESLIKILATGF
CLNEFTFLRDPWNWLDFTVIVMAYVGAFSDLGSVSVLRTFRVLRALKTISVVPGLKIIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFKGNLRQKCIRNSTGICNKTWESYEKFAND
SDDFARKNGTVDILLCGPGAGDCPPGYKCCKIGPNPDYGFTSFDTFGWAFLSLFRLMTQD
YWERLYQQTLRASGKVYVVFFMMVIFLGSFYLVNLILAVVTMAYEDQNKATIAETEAKER
KFREAMELLQKEQESLGIKGIDILSLTSFEASSLSPKEIKERSNREMRNKSLGREENEEE
LPKSQLPDSQRKLSLLGLAPAKRRPSHGSVFNFQIPAVEVELGSRTDLAAEGLKPRCRSL
SGAPMGRRPSLQSQRGHSSHPATPSWARSSDGANLDERLGVGSGLAGGSNRVHSQDPVSL
EGAVLPPVMEDAGKGNLPAVHDESSMMHLPPHLSAEYFNEALQRQRAASVVSIITSVLEE
HEEAQQKCPPRLKNFALKYLIWDCCPLWLRIKEKVAAFIQDPFFDLTITVCIVMNTLFMA
LEHNNMSPTFKFMLKIGNLVFTGIFTAEMILKIIALDPYYYFQKPWNIFDSVIVTLSLIE
LSFPRHKSKKERGKGGTLSVLRSFRLLRVFKLAKSWPTLNTLIKIICNSLGALSNLTLVL
AIIVFIFAIVGVQLFGRSYVLNCTKISKDCKPRWHMKDFFHSFLIIFRILCGEWIETMWD
CMVVAEPSLCLFVFLLVMVIGNLVVLNLFIALLLNSFSADSLQTTEDDGEMKNLRIAFAR
IRKGFHFVKSMTWDACCRKLRQIKKVHKKKIKLTAQNSLGLKSEEKKSCKENYNNEWIEK
NKDKCPGLEDFVRNPNVFVCVPIAEAEDTSEGFEDDDKLSTFTDTECSKQLDRISSSEVS
TVDLTNPEDVLKQIPEFSEDFKTPEECFPEGCARYFHCCLDSAAKLGGETWWNLRKTCYQ
IVEHSWFESFIVFMILLSSGALAFEDIHIHKRERIQAILGFLDKMFTYIFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIIDVSLINLFGSTFGPMKSLRTLRALRPLRALSRFEGMRVVVN
ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNMTDENSVLDNNIKNKTDCGM
YNNTGKIFWVNVKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDSREKDDQPEMENSLYM
YLYFVSFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPLNRYQGFLFNIVTSQMFDVVIMGLICLNMITMMVETYEQSETKTNILSKINIL
FVTIFTAECVLKLLALRQYYFSNAWNIFDLVVVIMSLVALLLSSIGKAFEHFLPPTLFRV
IRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKM
EGGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCDPNINGTVGECGKPAI
GIIYFVSYIIISFLIVVNMYIAIILENFNAATEESAEPLGEDDFDIFYEIWEKFDPEATQ
FITFSALSDFADALPKPLCVPKPNKVELTAMDLPVVSGDKIHCLDILFAFTKRVLGDSGE
LDTLRVQMEEKFMAANPSKQSYEPISTTLSHRQEEASATVIQRAYRSYLLQRSLKQASYL
YQHRTGSSDTLGDAAPENEGLIASMLRANYGPSRSETSSSVSIPPSYYSVTRESSGNLVV
ENVEITGNQQSPDIK
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcttgctacctggaaccaacaacttccgcaggttcactcaggaatccttg
gcagcgatcaaaaagagaattgatgccaaaaagaattgtcaaaaaaataccacagagcag
aaacctgaggagaaaccacgtcctcagcttgacctaaaagctttccagaagttgccagct
ctctatggaaatcctcctccagagctcattggggaaccactggaggatctcgacccctac
tacaaagatcataaggttttcatagtgctaaacaagcagaaaacaatctacagatttact
gccacacgtgccctgtggatcttcagtcccttccatccaatacgaagaagagcaattaaa
attttaatactaacattgttcacctggtttatcatgtgcaccatattaactaattgtgta
ttcatgtctctgactgagtcatccaagacttcatcaccttcatggaacacatatgttgaa
tttaccttcactggcatttacacttttgaatcattgataaaaatattggcaacaggattc
tgtctaaatgaattcactttcctccgggatccctggaactggttggatttcaccgttatc
gtcatggcgtatgtgggagcatttagtgacttggggagtgtgtcagtcctccggactttc
agggttctcagggctttaaaaaccatttcagtagtcccagggctcaagatcattgtaggg
gcacttatccagtctgttaagaaacttgcagatgtgatgatcctgactgttttctgcctg
agtgtttttgccctcataggcctccagctttttaagggcaatctcaggcaaaagtgtatc
aggaactctaccgggatttgtaataaaacatgggaaagttacgaaaagtttgctaatgat
tcagatgactttgctaggaaaaatggtactgtggatattttgctgtgtggtcctggtgct
ggggactgtcctcctggctataaatgctgtaaaattgggccaaatcctgattatggtttc
accagttttgatacatttggctgggcttttctttccttattccgcctgatgacccaggac
tactgggagcgtctgtaccaacagaccctcagagcttctgggaaggtgtatgtagtcttc
ttcatgatggtcatctttctgggctcattttatctagtcaacttgattctggctgtagta
acaatggcatacgaggaccagaacaaggccaccattgctgaaaccgaggcaaaggaaagg
aaatttcgggaagctatggaattactgcagaaggagcaagagtcactgggtattaaaggg
attgatatcctgtcacttacctcctttgaagcctcttctctgtcacccaaagaaatcaaa
gaaaggagcaatagggaaatgagaaataagtcattggggagagaagaaaatgaagaagaa
cttcccaagtcacagctcccagacagtcaacgaaagttgtctctcctgggcctggcccca
gccaagcgccggccgagccacggcagcgtcttcaacttccaaatccccgccgtggaggtg
gagctgggctccaggacggacctcgctgccgagggactcaaaccccgctgccggtccctg
tcgggagcgccgatgggaaggcgccccagcctgcaaagccaacggggccacagctcccac
cccgccaccccgagctgggcgcggagcagcgacggggccaacctggatgagcgccttggg
gtgggctcggggctggcaggagggagcaacagggtgcacagccaagatcccgtgtccttg
gaaggagctgtgcttccaccagtcatggaagatgcgggaaaggggaatctgccagctgtg
catgatgagagcagcatgatgcatttacctcctcatctgtcagcggagtactttaatgag
gctcttcagagacaaagggcagcaagtgtagtcagcataattaccagtgtcttggaggaa
catgaggaagctcagcagaaatgcccaccacgcctgaagaactttgctttaaagtatcta
atttgggactgttgcccactttggttgagaatcaaggaaaaagtggctgctttcatacag
gatcctttttttgatctcaccatcacggtttgcattgtgatgaacactttgttcatggca
ctggagcacaataatatgtcacctacttttaaattcatgcttaaaattggaaacttggtt
tttacaggaatcttcactgcagaaatgatcttaaaaatcatcgctctagatccctattac
tattttcagaaaccctggaatatttttgacagtgtcattgtcacactgagtttaattgaa
ctgagtttccccagacacaaaagcaagaaagaaaggggaaaaggaggaaccctgtcagtt
ttacgatccttcagactgctgagggtcttcaaactggcaaagtcctggccaactttaaac
acactaattaaaataatttgtaactccctgggagcactgagtaatctgaccctcgtcctg
gcaatcatcgttttcatttttgctatagtaggggtgcaactttttgggagaagttatgtg
ctcaactgcactaaaataagcaaagactgcaagccacgctggcacatgaaggactttttc
cattccttcctcatcattttccgaattctgtgtggagaatggattgagaccatgtgggac
tgcatggtggttgctgaaccatcactgtgtctttttgtctttctgctggtcatggtgata
ggaaatttagtggttctcaaccttttcattgcactgctgctgaattcttttagtgctgac
agcctccagacaacagaggatgatggagagatgaagaatcttcggattgccttcgctcgg
atccgcaagggattccactttgtcaagagcatgacgtgggatgcctgctgtaggaagctc
aggcagataaagaaagtgcacaagaagaaaatcaaattgactgcacagaactcgcttggg
ctcaagagtgaagagaaaaaaagttgtaaagagaattacaataatgaatggattgagaaa
aataaggacaaatgcccgggtcttgaagattttgttagaaaccccaacgtatttgtttgt
gtccctattgctgaggcagaggatacaagtgagggtttcgaagatgatgataaactgagc
acatttactgacacagaatgcagcaaacagttggacaggatcagctcttctgaagtcagc
acagtggatctgacaaatcctgaagatgttttaaaacagattccagaattttctgaagac
ttcaagactccagaagagtgttttccagaaggttgtgctcggtacttccattgttgcctg
gatagtgctgcaaagttgggaggagaaacctggtggaatctgagaaaaacttgctaccag
attgtggaacattcttggtttgaatcctttattgtgttcatgattcttctgagcagtgga
gccctggcatttgaagacatccatatacataagagagaaagaattcaagcgatattagga
tttcttgacaaaatgttcacttacatctttgtcctggagatgctcctgaagtgggtggct
tatggcttcaagaagtatttcaccaatgcctggtgctggctggacttccttattatagat
gtctctttgataaacctctttggcagtacctttggccccatgaaatctctcaggactctg
cgagctctgagacccttgagagcactgtcacgatttgagggaatgagggttgtggtcaat
gccctcctgggagccatcccttccatcatgaatgttctgctggtctgcctcatcttctgg
ctcatcttcagcatcatgggagtgaacctctttgctgggaagtttgggaaatgtgtcaat
atgacagatgaaaattctgtattagataacaacatcaagaacaaaacagactgtgggatg
tataacaacactggaaaaatattctgggtcaatgttaaagtcaattttgataatgttggc
tctggctatctggctcttcttcaggtggcaacatttaaaggttggatggatatcatgtat
gcagcagtagattcaagagagaaagatgatcagccagagatggagaacagtctctatatg
tatctctactttgtgagcttcatcatctttgggtcttttttcaccctgaacctctttgtt
ggtgtcatcattgacaactttaaccagcaaaagaaaaagataagtggggaagatatcttt
atgacagaagaacagaaaaaatactacaatgcaatgaaaaagctgggatccaagaaacct
caaaaacccattccaagacccttgaacagataccaaggtttccttttcaacattgtgaca
tcccaaatgtttgatgttgtcatcatgggtctcatctgcctcaacatgatcacaatgatg
gtggaaacttatgagcaaagtgaaacgaagacaaacatactcagcaaaatcaatatactc
ttcgttaccatctttactgcagaatgcgtgctgaaattgctggctctgaggcagtactac
ttctcaaatgcctggaacatatttgatttagttgttgttattatgtcacttgttgcctta
ctgctttccagcattggcaaagcctttgaacatttcttaccacccacactcttcagagtc
attcgcttggcccggattggccggatcctgagactcatccggggagccaaaggaattcga
actctcctgtttgccttaatgatgtcccttcctgctctgttcaacattggcctcttgctg
tttctggtcatgttcatttatgccatttttggcatggctaactttgcctatgtgaagatg
gaaggtggcattgatgacatgttcaacttccaaacctttgctaacagcatgctctgtctc
ttccaaatcaccacatcagctggctgggatggtcttctcagtcctattttaaacactggg
ccaccattctgtgatccaaacataaatggtacagtgggtgaatgcggtaaacctgccata
ggtattatttattttgtaagttatatcattatatcatttctaattgttgtaaacatgtat
atagccattattctggagaatttcaatgctgccactgaggaaagtgcagagcctttaggg
gaagatgactttgatatcttttatgaaatctgggagaagtttgatcctgaggcaactcag
tttataactttctctgcactttcagactttgcagatgctctgcccaagcccttgtgcgta
ccaaaaccaaacaaagttgaactcacagcaatggacctgcctgtggtcagtggggacaag
atacactgcttggatatcttgtttgctttcaccaagagggtgttgggagattctggggag
ctggatactctgagagtacaaatggaggagaaattcatggctgccaatccatcaaaacaa
tcctacgagcccatatcaaccacgctcagccacaggcaagaggaggcgtcggccacggtg
atccagcgtgcctacaggagttacctgctccagcgctccctcaaacaggcttcctacctg
taccagcacagaactggcagctctgacactctgggagatgctgctccagaaaacgaagga
cttattgcatctatgctgcgtgcaaattatggtcctagcaggtctgaaacgtcgtcctca
gtgtccatccctccgtcgtattacagcgtcacaagagagagtagtggcaatcttgtggtt
gagaatgtagaaataacaggcaatcaacaatctccagacattaagtag
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integrated database retrieval system
