Lonchura striata domestica (Bengalese finch): 110485000
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Entry
110485000 CDS
T05897
Symbol
CNGA1
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110485000 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110485000 (CNGA1)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110485000 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
MRP-S26
Connexin
DUF2207_C
SlyX
CIS_TMP
Sec62
Motif
Other DBs
NCBI-GeneID:
110485000
NCBI-ProteinID:
XP_021411716
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All DBs
Position
4:46111965..46116541
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AA seq
650 aa
AA seq
DB search
MKVGVIETHHSHTVVPTVVVHDTSKDLGWMHKEENRYIKYILQQHLPGVFACYNINNNSN
KDEXKKRKKERKSKPEKKKDGETQKNKGKKEKNKNKDKLKKKENIEEKKKDIFTIDPAGN
IYYNWLFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYVSDAIYVADMFVRTRTGY
LEQGLLVKEEHKLREKYKKSFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFE
FFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNISDPEFA
RLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNM
NAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRA
EIAINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGK
LAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLME
ALTEYPDAKAMLEEKGKQILMKDGLLDIEIANLGSDPKDLEEKVAYMERAMDRLQTKFAR
LLAEYEGAQQKVKKRLTQIEKILKPVIEEEFADLEEADPSTDKPGLSKAE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccacacagttgttcccactgtggtagta
catgacaccagtaaggatcttggatggatgcacaaagaggaaaacaggtacatcaaatat
attttgcagcaacacctacctggagtatttgcatgctacaatattaacaataatagtaat
aaagatgagtaaaagaaaaggaaaaaagaaaggaagagcaagccagaaaaaaaaaaggat
ggagaaacacaaaagaacaaaggaaaaaaggagaaaaataaaaataaagataagttgaag
aaaaaagaaaatatagaagagaagaagaaagacattttcaccattgatccagcaggaaat
atatattacaactggttgttttgcatcacaatgcctgtcatgtacaattggaccatgatt
attgctagagcctgttttgatgagcttcagcatgattacttagtggcatggtttattatt
gattatgtttctgatgccatttatgttgctgatatgtttgtacggacaaggacaggttac
ctggagcaaggtcttctggtgaaagaagaacataaactacgagagaaatacaagaaatct
tttcaattcaaactagattttctgtcaatcataccaactgatctcttatactttaagtta
ggattgaattacccagaattaagaataaacagactacttagagtagctcggatgtttgaa
ttcttccagagaacggaaacaagaacaaactacccaaatatcttcaggatctctaacctt
gtcatgtacattgtgattattattcactggaatgcctgtgtgtactactccatctcaaaa
gccattggatttggggctgacacatgggtctaccccaacatctcagatcctgaatttgcc
cgcctgactagaaaatatgtctatagtctctactggtcaacgctgactctgactactatt
ggtgaaacccctcctcctgtaagagattctgagtatttctttgtggtcgttgacttcttg
gttggagtactgatctttgctaccattgttggtaacgtgggctcaatgatctccaacatg
aatgctgccagggcagagtttcaagcaaggattgatgctatcaagcagtatatgcacttt
cggaatgtgagtaaggacatggaaaaaagagttataaagtggtttgactacctgtggaca
aacaaaaaggctgtggatgaaagagaagtcttgaagtatctgccagataaactaagagca
gagattgcaatcaacgttcacctggaaacgctaaaaaaagttcgtatttttgcggactgt
gaagcgggtttgctggttgaactggttttgaagctccagccccaagtttacagtcctgga
gactatatttgcagaaaaggagatattggacgagagatgtacattatcaaagaaggcaag
ctggcagtagttgctgatgatggaattacccaatttgtggtcctaagtgatggcagctac
ttcggagaaatcagcattcttaatatcaagggtagcaaagctggcaatcgaagaacagcc
aatattaaaagtattggatactcggacttgttttgtctgtctaaagatgatctcatggag
gctttaacagaatatccagatgcaaaggctatgctggaagaaaaaggcaagcaaatccta
atgaaagatgggctgctggacattgaaattgcaaatttaggaagtgatcctaaagatctg
gaagagaaggtcgcctacatggaacgtgctatggacaggttacaaacaaagtttgccagg
ttgttggccgagtatgaaggtgcacaacagaaagtgaaaaaaagacttacacaaatagag
aaaatattgaagccagttatagaggaggagtttgcagatttagaagaagcagatccatcc
acagataaacctggattgtcaaaagcagaataa
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