Lactuca sativa (garden lettuce): 111876260
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Entry
111876260 CDS
T05352
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111876260
Enzymes [BR:
lsv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
111876260
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111876260
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GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
111876260
NCBI-ProteinID:
XP_023728568
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Position
1:complement(22650792..22654579)
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AA seq
659 aa
AA seq
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MSSTAATASISTTSLTTHLTILAFLSATTVYCFYKSSRLRHLKLSSPSTNPNLSSATRKG
KLFFISQTGTSRTLAQRLFNLLTSNNLPFELVDPNVYEPEDLHQENLVLIIASTWEDGNP
PSNGVFLSNWLSESAEDFRVGSLLLSKCKFAVFGVGSRAYGDNFNAVGRGLSTKMRSLGA
SEILPLCEGDVDEGELDKAFGIWSKEVIKVLKAGELRGNGNDLIEENGYEMIDGSDYEDD
DDDYEDEDEENGMESDIVDLEDIAGKAPSKKDMGAITSNGKKNGQKEMVTPVIRASLKKQ
GYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHH
TNPVGKSWQWKMDDPLMIVNSALEEHKKMIKQMKGVPGVTAERLSEGLLPRHCALSLVGE
PIMYPEINSLVDELHKRRISTFLVTNAQFPEKIVSLKPITQLYVSVDAATKDSMKAIDRP
LFGDFWERFGDSLKALKDKQQRTVYRLTLVKGWNTEDVDAYSSLFGIGNPDFVEIKGVTY
CGTSATSKLTMENVPWHADVKAFSEALAEKSNGDYEIACEHVHSCCVLLAKVDKFKINGQ
WHTWIDYDKFHDLVASGEPFGSNDYMAPTPSWTVYGANEGGFDPDQLRYKKERNHKSTR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccactgccgccactgccagtatatccacaacgtctctcacaacacatctcact
attctcgctttcctttccgccaccaccgtctactgcttctataaatccagccgcctccgc
caccttaaactatcctccccctccacaaaccctaatctctcttctgctactcgaaaagga
aaactattctttatctctcaaacaggcacctctaggactctagctcaacgtctcttcaac
ctattgacctcaaataacctcccatttgaacttgttgacccaaacgtctatgagcccgaa
gacctccatcaagaaaacctagttttgatcattgcatcgacatgggaagacggaaatcct
ccatccaacggcgttttcttgtcgaattggttgtcggagagcgctgaggacttcagagtg
gggtcactgttgcttagcaagtgcaaatttgctgtatttggggttggcagccgagcttat
ggagataattttaatgcagtcggaagagggttatcaacgaaaatgcgatctcttggagca
tcggagattttgcctctttgtgaaggggatgttgatgagggtgaattagataaggccttt
ggtatttggagtaaagaagtgattaaagttttaaaagcaggtgaattgaggggaaatggg
aatgatttaattgaggaaaatggttatgagatgatcgatggatcagattacgaagatgat
gatgatgattacgaggatgaagatgaagaaaatgggatggaatctgatattgttgattta
gaagatattgcaggcaaagcaccttcaaagaaagatatgggagcaatcacaagtaatgga
aaaaagaatgggcagaaagaaatggtaactccagtgatcagggctagcttgaaaaagcag
ggttataagattattggttcacatagtggtgttaaaatatgtcggtggactaaatctcaa
ctcagaggacgtggaggttgttataagcactccttttatggaatcgagagtcacaggtgc
atggaagcaacaccaagtttggcatgtgcaaataaatgtgtcttctgttggagacatcac
actaaccctgttggaaaaagctggcagtggaagatggatgaccctttgatgattgtgaat
tctgccttagaagaacataagaaaatgataaaacaaatgaaaggagttccaggtgttaca
gcagagcgcctatcagagggtttgttacctaggcattgtgccttgtcacttgttggggag
cctattatgtatcctgagatcaattcacttgtggatgaactccacaaaaggcgaatttcc
acttttttagtgacaaatgcacagtttccagaaaagattgtgtcactaaaacccatcaca
cagttgtatgttagtgtagatgctgcaacaaaggacagcatgaaggcaatcgataggcca
ctttttggggacttctgggagcgctttggtgattcattgaaagctttgaaagataagcaa
caacgaacagtgtatcgtttgacacttgttaaaggatggaacacagaggatgtggatgcc
tattcttccctctttggcattggaaaccctgattttgttgaaatcaaaggtgttacctat
tgtggaacgtcagccacatcaaagttgactatggaaaacgtgccatggcatgctgatgtg
aaagctttttctgaagccttggctgaaaaaagcaacggggattatgagattgcttgtgag
catgtgcactcgtgttgtgttcttttagcaaaagtggataagttcaagattaatggtcaa
tggcatacatggatagactatgacaagtttcatgacttggtggcatcgggagaacctttt
ggtagtaatgactatatggcccctactccatcttggaccgtttatggagccaatgaaggc
gggtttgacccggaccagttgcgatataagaaagagaggaatcacaaatccacccgttga
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