Lactuca sativa (garden lettuce): 111881407
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Entry
111881407 CDS
T05352
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111881407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111881407
04147 Exosome [BR:
lsv04147
]
111881407
04090 CD molecules [BR:
lsv04090
]
111881407
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111881407
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111881407
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111881407
CD molecules [BR:
lsv04090
]
Proteins
111881407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_29
AAA_16
AAA_21
AAA_22
AAA_15
PRK
Zeta_toxin
nSTAND1
AAA_18
G-alpha
NB-ARC
CPT
Motif
Other DBs
NCBI-GeneID:
111881407
NCBI-ProteinID:
XP_023733569
LinkDB
All DBs
Position
1:34477063..34480440
Genome browser
AA seq
1068 aa
AA seq
DB search
MFIAAEITGMYLCWRLAIVAVPAMFLLILPGSIYGKRLSSNEEKLQEAYAVAGGVAEQAF
SSIKTVHSYVGEEKMVNRFSTALGPTLSLGIEQGLLKGIVFGSVGVIYAIWALLSWYGGV
LVIDKGLKGGDILSAGVCVIYGGFGLGSSFMNIKYFAEAGISAGVISEMIERIPTIDSED
QQGTTIDTIKGELEFKDVYFAYPSRPESLVLKKFNLKVKPCQTVGLVGSSGSGKSTVINL
IERFYDPLEGEILLDDISIKSLKLNWLRRQIGLVSQDPILFATSIKENILFGKEDATSEE
IVEAAKRANAHEFITQLPKAYDTQVGELGTQMSGGQKQRISIARVLLRDPKILLLDEATS
SLDSHSEKAVQQALTQASIGRTTLIIAHRLSTLDNADVIFVIQSGEVIESGSHNQLVSNT
HGPYSTMVQLQNTLSVNGQTVSPSQETKIKTLDDDDDDDDDDDDDGGGLSMRREKTRLIV
DSSYLEKDSNLSWKELIRMNAPEWKSALVGCIGALLNGLIQPLLAFFQGAMLSIFFLKNH
DEIRSQTTTLCYIFLAIAGFSFIIGVIQHYYFGIMGENLTKRVRESMFSKIMSFEIEWFY
QENNNTGALCSRLATDTIMVRNLVADRLAFFAQAISASISAVILSMILSWKLALVAVSLQ
LVIIVCFYLKALVTTETENKSSEIASEAVNNHRVITAYHSQEQVMRLFEETQKGRKMESD
KKNWYQGMALFARPFLTNINIAILYWYGGRLLYEGDITFKHLFQTFYIVVSAGMIIAETG
SMTGDLSLGKNALQSLFMILKREGKMQTPKQDMIMPEKVEGRIELKEVDFFYLSRPTKMA
LKGLSLKINGGEVVALVGTSGSGKSTIIGLIQRFFDPCKGSVEVDGVDIIRYNLRALRSF
IAWVSQEPTLFAETIKENIAYGKENATEAEIIQAANLANIHEFISSMKDGYETYCGERGV
QLSGGQKQRIVIARAILKNPAILLLDEATSALDLRSEALVQDALEKTMVGRTCVIVAHRL
STIQRSNKISVIDNGRVVEEGSHDDLLAKGKEGAYFSLFSLQQQTSHK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttatagcggctgagataacgggtatgtatttgtgttggagattggcgattgtggcg
gtccccgcgatgtttttgttgattcttccggggtcaatttatggaaagcgattatcaagc
aatgaagagaagctacaagaagcttatgcggttgctggtggggtcgcagagcaggctttt
tcatcaataaagacagttcattcgtatgttggagaggaaaaaatggtgaatcggttttca
accgcgttaggacccactttgagtcttgggatcgaacaaggtttactgaaagggatagtg
tttggaagtgttggagttatatacgcaatttgggcgcttttaagctggtacgggggcgtt
ttggtcattgacaaggggttgaaaggtggagatattcttagcgcgggagtttgtgttatc
tatggaggatttggattgggaagttctttcatgaacataaagtactttgcagaagcaggt
atttcagcaggggtgattagtgaaatgattgaaagaatcccaaccatagattccgaagat
caacaggggacaaccatagatacaatcaaaggtgaattggagttcaaagatgtctatttt
gcatacccatcaagacctgaaagcttggttttaaagaaattcaacttaaaggtgaagccc
tgtcaaaccgttggactggttggtagcagtgggtcaggtaagtcaacagtgataaatctg
attgaaagattctatgatcctcttgagggagagattctgttagatgacatcagcataaag
tcgctcaagttaaattggttacgtagacaaatcgggttagtgagccaggatcctatactt
ttcgccacatcgatcaaagagaatattctattcgggaaagaagatgccacaagtgaagag
attgtagaagcagctaaaagagcaaatgcacatgaattcatcacacaactacccaaagct
tatgacacacaggtgggagaattaggaactcaaatgtcgggagggcagaagcaacggatt
tcaattgcgcgggtcctacttcgagatccaaaaatcttgcttttagatgaggccacaagt
tcattagattcacattctgaaaaagctgtacaacaggctttaactcaagcttcaattgga
agaacaacactaatcattgcacatcgtttatctacactcgataatgcagatgtaattttc
gtaattcaatcaggtgaagtaatcgagtccggatcacataaccaacttgtttcaaacact
catggaccatattcaaccatggtccaactacagaacacattgtcggtcaacggtcaaacc
gtatcaccgtctcaagaaaccaaaatcaagacattagatgatgatgatgatgatgatgat
gatgatgatgatgatggtggtggtttatccatgagaagagagaaaacgagactgatagta
gatagttcttatcttgaaaaagatagcaatctatcatggaaagaattgattcggatgaat
gctcctgaatggaaatcggctctagttggttgtataggtgctttacttaacggattaatt
caaccattactcgcgttttttcagggtgcaatgctttccattttctttctaaaaaaccac
gacgaaatccggtctcaaacaacaacattatgctacatttttctagccattgctggattt
tctttcatcatcggtgtgatccagcattactattttggaatcatgggtgagaatttaacg
aaacgtgtccgagaatcaatgttttcaaagatcatgagttttgaaatcgagtggttttat
caagaaaacaacaacacgggagcattatgttcaagacttgctacagacacaatcatggtg
agaaacctcgtagcagatcgattggcgttttttgcacaagcaatctcggcttcaatttca
gcagttattttgagtatgattttgtcttggaaactcgctcttgttgctgtttccttacaa
ctagtcatcattgtgtgtttttacctaaaagcccttgtgacaacggaaaccgagaacaag
agcagtgaaatagcaagtgaagcggttaacaaccatagagttatcactgcgtatcattcg
caagagcaggttatgaggctgtttgaagagacacagaaaggtcgaaaaatggagagtgat
aagaagaattggtatcaaggaatggctttgtttgctagaccatttttaactaatatcaat
attgccattttatattggtatggaggaaggcttctttatgagggagatataacattcaaa
cacctttttcagacattctacattgtggtgtcagcagggatgataatagcagaaaccggg
agtatgactggggatttgtcattgggaaaaaacgcgttacaatccttgtttatgattcta
aaaagagaaggcaaaatgcagactccaaaacaagacatgataatgccagaaaaggtagaa
gggcgtatagaactgaaagaagtggattttttttatttaagcagacccacaaagatggca
cttaaaggtctaagtttaaagatcaatggtggtgaagttgttgcacttgttggaacaagt
ggatctggaaagtcaacaattatagggttgatccagcgattttttgacccgtgtaaaggg
tctgtggaagttgatggagtggatattatccgctacaatctgagggcgttaaggtcattt
atagcatgggttagtcaggagcctactttgtttgcagaaacaataaaagaaaacattgct
tatgggaaagagaatgcaacagaagccgagataatccaagcagcaaatctagcaaatatc
catgaattcataagttcaatgaaagatgggtatgagacttactgtggtgaaagaggggtg
cagttatcaggtggacagaagcaaagaatcgtgattgctcgagcaattttgaaaaatcca
gctattttacttcttgatgaggccacaagtgctttggacttgagatcagaggcacttgtt
caagatgctcttgagaaaaccatggttggtaggacatgtgtgattgtagctcatcgattg
tctacaattcaaagatccaataaaatatcagtgattgataatggaagagttgtagaagaa
ggatctcatgatgatctgttagctaaaggtaaagaaggtgcttacttttctcttttcagt
cttcaacaacaaacctcccataagtag
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integrated database retrieval system
