Lactuca sativa (garden lettuce): 111883838
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Entry
111883838 CDS
T05352
Name
(RefSeq) putative ABC transporter B family member 8 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111883838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111883838
04147 Exosome [BR:
lsv04147
]
111883838
04090 CD molecules [BR:
lsv04090
]
111883838
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111883838
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111883838
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111883838
CD molecules [BR:
lsv04090
]
Proteins
111883838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
ABC_ATPase
AAA_21
DUF815
AAA_15
AAA_30
AAA_24
KAP_NTPase
PRK
AAA_25
Motif
Other DBs
NCBI-GeneID:
111883838
NCBI-ProteinID:
XP_023735929
LinkDB
All DBs
Position
7:57995522..58003131
Genome browser
AA seq
1239 aa
AA seq
DB search
MSSPTKSPEKSMEENMKKKKKKSITIIFRYADWYDKLLIVLGTLGAIGDGMSTNVLLVFV
SRLFNSLGYGKGVQRNPENFMHEIEKCSLAFVYIGLGVMVMAFMEGYCWSKISERQVLKI
RYKYLEAILRQEVGFFDSQEATTSEIINSISKDTSLLQEVLSEKVPKFLMYTSMFLSGLA
FCTYFSWRMALVAFPTTVFLIIPGLIYGKYLLFLSKKSFLEYSKANSIVEQALASIKTVY
SFTAEKMIVEKYSMILDRTTEMGLKQGIAKGLAVGSTGLSFAIWALIAWYGSRLVMYKGE
SGGRVYTSGLAFVLGGLALGMALPELNHFTEASIAASRIFHRIDRVPEIDGEDIKGLVPD
EIHGQIEFENVEFTYPSRPNSIILKDFNLKIEAGSTVALVGASGSGKSTAIALVQRFYNA
DRGIIRVDGIDIKKLQLKWLRAQMGLVSQEHALFGTSIRENIMFGKIDATMEEVIAAATA
ANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESE
KLVQTALDQASMGRTTMVVAHKLATIRNADVIAVMSEGRVIEQGPHTELINSHTGQYAHL
VKLQRQFSSFNDEHHTPVTKSSASRLSTSKSSPAMFDSPMPFNDPQLLSSSNHPPPSFSR
LLALNSPEWKQAVIGSLAAATFGAVQPVYALTVGGMISAFFVLNHEEMNSRIRTYSIIFC
SLSIISILVNLLQHYNFAYMGEQLTKRIRLKMLEKILTFETAWFDDEENASGALCSRLSN
EASMVKSLVADRMSLLIQTGSGVLIAMIMGLIVAWKLALVMIAVQPLTILCFYARKVLLS
TMSANFIKYQNQSTQIAVEAVYNHRIVTSFQSLGIVLQLFDKAQDGPRREARKKAWLAGI
GIGSAQGLTFICWALDFWYGGKLVNAGEISAGDVFKTFFILISTGKVIADAGSMTSDIAK
GSKAVASVFSILDRQSLISTNVHEGDGSSGVKLEKLSGGIEIRKVDFAYPCRPETLILRE
FCLEVKPGTSVGLVGKSGCGKSTVIALVQRFYDTDRGTVKIDRVDIRMFNIEWYRKHMAL
VSQEPVLYSGTIRDNIIFGKVDASENELIEAAKAANAHTFISALKDGYETECGERGVQLS
GGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTVVVAHRLNTI
RHLDSIAFVSEGKVLEQGTYNQLKNKKGAFFELANLQKT
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgaccaagtcgccggagaaatcaatggaggagaacatgaagaagaaaaag
aaaaagtccataactattattttccgttatgccgattggtatgacaaattgttgatagtt
ttgggcacacttggagcaattggagatgggatgtctacaaatgttttattggtttttgtt
agtcgtctttttaatagtttgggttatggcaaaggtgttcaacgaaacccagaaaacttt
atgcacgaaattgaaaagtgtagtttggctttcgtgtacatcggtttaggggtgatggta
atggcgtttatggaaggatattgttggagtaaaataagcgaacgtcaagtcctaaaaatt
cgttacaaatatttggaggcgattttacgacaagaagttggtttctttgattcacaagaa
gcaacaacttcagaaatcatcaatagcatttcaaaagacacctccctcctccaagaagtc
cttagtgaaaaggtgccaaaattcttgatgtacacgtcgatgttcttatctggattagca
ttttgcacatacttctcgtggagaatggctttggtagcttttccaacgacggttttcttg
attattccaggtcttatctacggaaaatatctgttgtttttgtcaaaaaagtctttccta
gaatacagtaaggcgaacagtattgtggaacaagcgcttgcttccataaaaactgtttac
tcgtttactgctgagaaaatgattgtcgaaaagtactcgatgattttagaccggacaact
gaaatgggtttgaaacaaggaatcgcgaaaggtcttgctgttgggagcactgggctttct
tttgctatatgggcattgattgcgtggtatggaagccgtttggttatgtataaaggagaa
agtggagggcgggtgtacacctccggtcttgcattcgtgttaggtggattagctcttggg
atggcgttaccggaactgaatcacttcacggaagcatcaatagcagcgtcaagaatcttc
catagaatcgatcgagtcccagaaatcgatggtgaagatatcaaaggacttgtacctgat
gaaatccacggacaaattgaattcgaaaatgtcgaattcacatatccttcaagacctaac
tccattattctcaaagatttcaacctcaaaatcgaagcaggaagcactgtcgctctagtg
ggagcaagtggtagtggtaaatccaccgccattgctttggttcagagattttacaacgca
gatcgaggaattattcgtgttgatggaatcgatatcaaaaaactacagttgaaatggttg
cgagcacaaatgggactcgtaagtcaagaacacgcgctatttggaacgtcgattcgagaa
aacattatgtttgggaagatcgatgcaacaatggaggaagtaatcgctgctgcaacggcg
gccaatgctcataatttcatccggcagcttccggaaggatatgaaacgaaggtcggtgaa
agaggggcgttgttatcggggggacagaagcagaggatagcgattgctcgagcgattatt
aaaaaccctgtgattcttcttctcgatgaagctacgagcgcacttgattcggaatcggag
aaacttgttcaaactgctcttgatcaagcttccatgggaagaacaacaatggtggttgct
cacaagcttgcaacgatacgaaacgcagatgtgattgcagtcatgagtgaaggtagggtt
atcgaacaaggcccacacaccgaattaatcaacagtcacacaggtcagtacgcccattta
gtcaaacttcagcgccaattcagctcgtttaacgacgaacaccacactccggtgacaaaa
agcagtgcttcgaggttaagtacgtcgaaatcaagcccagcaatgttcgattcaccgatg
cctttcaacgatccacaattgctatcatcatcaaatcacccaccgccttcgttctcccga
ctccttgctctaaactcgccggaatggaaacaagcggtgattgggagcttagcagcggcg
acgtttggcgctgtgcaaccggtgtacgcgttaacagtaggaggaatgatttcagctttt
tttgtactaaatcacgaagagatgaattcccgaataagaacttactccataatcttctgt
tcactttccatcatctctatcctcgttaacctcttacagcattacaacttcgcatacatg
ggtgaacaattaaccaaaagaatcagactgaaaatgcttgaaaagatcttgaccttcgaa
acggcctggtttgacgatgaagaaaacgcaagcggtgcgttgtgctcgaggttaagcaac
gaagcttcaatggtgaaatctcttgtagctgacagaatgtcgttactaatccaaacgggg
tcaggggtgttgatcgccatgattatgggtttaatcgtggcttggaagcttgcacttgtg
atgatcgcagttcaacctctaacgattctctgtttctacgcaagaaaagtgctactttca
acaatgtcggctaacttcataaagtatcagaatcaaagcactcagattgctgttgaggct
gtttacaatcatcggattgtgacttcgtttcaaagtttagggattgttcttcagcttttt
gacaaagctcaagatgggccgagaagggaagcgaggaagaaggcgtggttggccggaatc
ggaatcgggtcagctcaagggttgacttttatatgttgggctttggatttttggtatggt
gggaagctggtcaacgccggagagatatcggccggtgacgttttcaagactttttttata
ttgatcagcaccggaaaagtaatagctgatgccggaagtatgacttccgatatagctaaa
ggctccaaagctgttgcttcggttttctccattcttgatcgccaatcactgatctccacc
aatgttcatgaaggagatggaagcagtggagtaaagttggaaaaactaagtggcggaata
gaaataagaaaagtcgattttgcatatccatgtagacctgagacattaatcttaagagaa
ttttgtttagaagtaaaacccggaacaagcgtaggattagttggaaaaagtggttgtgga
aagtcaacagttattgcattggtccaaagattctatgatacagacagaggtacggtgaaa
atagaccgagtagacataaggatgttcaacattgaatggtatagaaagcatatggcactc
gttagccaagaacccgttttatattcgggcacgattcgtgacaatattatttttggaaaa
gttgatgcttctgaaaacgaattgattgaagctgctaaagctgcaaatgctcatactttc
atctcggcactaaaagacgggtatgaaactgaatgtggtgaaagaggagtacaattatca
ggtggacaaaaacaacgaattgcaattgctagagcaattattcgcaacccaacaatctta
ctactagacgaagctacaagtgcccttgatgtccaatcagaacaagttgttcaagaagca
ctggatcgaattatggttggaaggactacagttgtagtggcacatcgacttaatacaata
agacacctcgactcaattgcttttgtgtctgaagggaaagttttggaacaaggaacttat
aatcaactcaaaaataagaaaggggcgttctttgaactagctaatcttcagaaaacataa
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integrated database retrieval system
