Lactuca sativa (garden lettuce): 111884111
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Entry
111884111 CDS
T05352
Name
(RefSeq) ABC transporter B family member 2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111884111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111884111
04147 Exosome [BR:
lsv04147
]
111884111
04090 CD molecules [BR:
lsv04090
]
111884111
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111884111
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111884111
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111884111
CD molecules [BR:
lsv04090
]
Proteins
111884111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
AAA_16
AAA_22
AAA_21
RsgA_GTPase
AAA_15
DUF87
nSTAND1
AAA_30
AAA_23
DUF815
Motif
Other DBs
NCBI-GeneID:
111884111
NCBI-ProteinID:
XP_023736198
LinkDB
All DBs
Position
3:26508372..26516725
Genome browser
AA seq
1254 aa
AA seq
DB search
MSSNPSSLSVDGGGVDTKDDKKRETLKPKTVPMLKLFAFADSYDYFLMFFGSLGACIHGA
SVPVFFIFFGKLINIIGLAYLFPKEASHKVAKYSLDFVYLSVVILFSSWTEVACWMHSGE
RQAAKMRMAYLKSMLSQDISLFDTEASTGEVISAITSDIIVVQDAISEKVGNFMHYISRF
LSGFIIGFVRVWQISLVTLSIVPAIAIAGGVYAYVATGLIARVRKSYVKAGEIAEEVIGN
VRTVQAFSGEEKAVNSYIAALSNTYKYGRKAGLAKGLGLGTLHFVLFLSWALLVWYTSIV
VHKNIANGGDSFTTMLNVVIAGLSLGQAAPDISAFIRAKSAAYPIFEMIERTTVTKTSSN
TGRTLAKLDGHIRFDDVRFSYPSRPDVMIFDKLRLDIPSGKIVALVGGSGSGKSTVISLI
ERFYEPLSGRVLLDGHDICELDIKWLRHQIGLVNQEPALFATTIKENILYGKDSATYEEI
THAAKLSEAITFINNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSA
LDTESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADTIAVVQNGKIVETGSHEELMAQPN
SAYSSLVQLQGAASLHGGPSRAPSMGRPSSIRFSRELSRTTTRSLGASFHSDRESVGKLG
VEGVEYTKPTHISAKRLYTMIKPDWIYGLTGTIGALISGSTMPLFALGISQALVAYYMDW
ETTQHEVKKIAILFCCGAGISITVYAITHLCFGIVAERLTLRVRQKMFSAILRNEIGWFD
DTNNTSSMLASRLESDATLLRTVVVDRSTILIQNFGLIMTSFVIAFILNWRLTLVVMAMY
PLIISGHISEKMFMKGYGGDLNKSYLKANMLAGEAVSNIRTVAAFCSENKVLDLYSRELV
GPSKQSFNRGQIAGLFYGVSQFFIFSSYGLALWYGSVLMEKGLSGFKSVMKSFMILIVTA
LAMGETLAMAPDLLKGNQMVASVFEVLDRRTQVVTDVGEELARVDGTIELKGVNFSYPSR
PDILIFKDFDLRVRAGKSMALVGQSGSGKSSVLSLILRFYDPTSGKIMVDGKDIKKLKLK
SLRKHIGLVQQEPALFATSIFENILYGKEGASESEVIEAAKLSNAHNFISALPEGYLTKV
GERGIQLSGGQKQRVAIARAVLKNPAILLLDEATSALDVESERVVQQALDRLMKNRTSIV
VAHRLSTIKNADEISVIQNGKIVEKGTHSSLVENENGPYSKLVNLQQQEQHRRK
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaatcccagttcactctccgtcgacggcggtggcgttgacaccaaagatgac
aagaaacgtgaaaccctaaaacccaaaacagttccaatgctaaaactgtttgcatttgcc
gattcttatgattacttccttatgttttttgggtccctcggagcatgcattcacggtgca
tcggtgcctgttttcttcatctttttcggcaagttgatcaacatcatcggacttgcttat
ctatttcccaaagaagcttctcataaagttgcaaagtattcgttggattttgtgtatctt
agtgtggtaatactcttttcttcttggactgaggtggcttgttggatgcatagcggagaa
agacaagcagcaaaaatgagaatggcgtatttgaaatcgatgttaagtcaagatattagt
ctttttgacacagaagcttcaacaggcgaagtcatttctgcaattactagtgatattatt
gttgttcaagacgctatttctgagaaggtggggaacttcatgcactacatcagcagattt
ctatcaggattcataatagggttcgttagggtgtggcagataagtctggtgactttgtca
attgtacctgcgattgcaattgctggtggtgtctatgcttacgtggcaactggacttatt
gcaagagtccggaaatcatacgtcaaagctggtgaaattgctgaagaggtaatcggaaat
gtaagaacagtgcaagcattttccggtgaagaaaaggcagtaaattcatacatcgccgcc
ctttcaaacacttacaaatatggcaggaaagccggtctcgccaaaggcctgggacttggc
accttgcatttcgtcctcttcctctcttgggccttgctcgtctggtacacgagtatcgtg
gtccacaaaaacatcgccaatggcggcgattccttcaccaccatgctcaatgtcgttatc
gctggcttgtcacttggtcaggctgcaccagacattagtgcattcataagggcgaaatca
gcagcgtacccaatttttgaaatgatcgagaggacgacagtgacaaaaacgagttcaaac
acgggccggacattggctaagttagatggacacataaggtttgatgacgtgcggtttagt
tacccttcaagaccagatgttatgatctttgacaagcttcgtctcgatattccttccgga
aagattgtggccctcgttggcggaagcggttcgggaaagagcacggttatatcgttgata
gaacggttctacgagccgctctcgggtcgggtcttgttagacgggcatgacatctgtgag
cttgacatcaaatggttgaggcatcagatcgggctcgtgaaccaagagcccgctctgttt
gccacaaccataaaagaaaatatattatacggaaaggattcggctacttatgaagagatc
acacacgctgcaaagttatctgaagcaatcacgtttattaacaatcttccggagagattt
gagacgcaagtgggcgaacgcgggattcaactgtccgggggacaaaaacaacggattgcg
atttcacgtgcgattgtgaagaacccttcgatccttttgttagatgaagcgaccagcgcc
cttgacactgagtctgaaaagagcgtgcaagaggcgctcgatcgcgtgatggtgggacgg
acaactgttgtggtcgcccatcggctttccaccattagaaacgcagatacgatagccgtg
gttcaaaatgggaagattgtggaaaccggaagccatgaggaactcatggcccaacccaat
agcgcgtattcatcgcttgtgcaacttcaaggagctgcttccttgcatggaggcccatct
cgcgctccctccatgggaagaccttccagcattaggttttctcgtgagctatcacggaca
actacgaggagtctaggagctagttttcattcggatcgtgaatcagttgggaaacttggt
gttgaaggggttgaatacacgaagccgacacatatttcagcaaaaagactatacacgatg
atcaaaccagattggatttacgggttaacgggtacaataggcgccctaatatcagggtcc
acgatgcctctttttgctctcgggataagtcaagcgcttgtggcttattacatggattgg
gaaaccacacaacatgaggtcaaaaagattgccattctattttgttgtggtgctggcata
agtataactgtttatgccatcactcatttatgtttcgggatcgtggcagaaaggctcact
cttcgtgttcgccaaaaaatgttttcagctattttaagaaacgagattgggtggttcgat
gacacgaataacacaagctcgatgcttgcttcccgtttagaaagtgatgcaacattacta
agaacagtggtggttgatcgatcaacgattttgatacagaattttgggttaattatgact
tcgtttgtgattgcgttcattttgaattggaggcttacacttgttgtaatggcaatgtac
cctttgataatcagtggtcacataagcgagaaaatgttcatgaaagggtatggtggtgat
ttaaacaaatcttatttgaaagctaatatgcttgctggagaggctgtgagcaacataaga
acagttgcagctttttgttctgaaaataaagtgctcgatctttactccagagagctcgtc
ggaccttcaaaacagtcgtttaatcgtgggcagatcgccggattattctacggtgtttcc
caattctttattttttcatcttatggtctcgcattatggtatggttctgttttaatggaa
aagggtttatcgggattcaaatcggtgatgaaatcgttcatgattctaattgtgacggcg
ttggccatgggcgaaacgctagctatggcaccggatttattgaagggaaaccagatggtt
gcttcggtgtttgaagttcttgaccggagaacacaagtcgtgactgatgtaggagaagaa
ctcgcaagagtcgatgggacaatcgagctcaaaggcgtcaatttcagctacccttcaaga
cctgacattttgattttcaaggatttcgatctcagagttcgagcagggaagagcatggcg
ttggtgggtcaaagcggttccgggaagagctccgttctgtccttgattctccggttctac
gatccgacctccgggaagatcatggttgacggaaaggacatcaagaagctgaaattaaag
tctctaagaaaacacatcggattagtccagcaagaaccggcgttatttgcaacatcgatt
ttcgaaaacatactttacgggaaagaaggagcttcagaaagcgaagtgatcgaagcagct
aagctttccaacgcgcataatttcataagcgccttaccggagggctacctgactaaggtc
ggcgagcgagggattcaactttccggtgggcaaaaacagagggtggccatagcaagagca
gtgttgaagaatccggcgatattgttactggatgaagcgacgagtgctcttgatgtggaa
tcggagcgagtggttcaacaagctttagaccggctgatgaagaacagaacgagtattgtg
gtggcgcaccggttgtcaacgattaagaacgccgatgagatatcggtgattcagaatggg
aagatagtggagaaaggaacacattcgagtcttgttgagaatgaaaatgggccttattcg
aagcttgtgaatctacagcagcaagaacagcatcgccgtaaataa
DBGET
integrated database retrieval system
