Lactuca sativa (garden lettuce): 111884979
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Entry
111884979 CDS
T05352
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g24000, mitochondrial
Organism
lsv
Lactuca sativa (garden lettuce)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
DYW_deaminase
PPR_1
PPR_3
E_motif
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
111884979
NCBI-ProteinID:
XP_023737054
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Position
7:complement(198809767..198813114)
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AA seq
1020 aa
AA seq
DB search
MLFLGMHRVGVIANQFLYWNALTPCSSLKSLHRGMHQFGGTIISVFLEKGFSEITNETVG
KSLHAFCIKNYLRLSIFHTNTLINMYSKHGKFEAARYVFDEMPQRNEATWNTMISALVRV
SLYSDAFLLLSQMRAQGFETSGFVIASLLTGCTGSGFMLHQGFQIHGLILKNGLLYNVYA
GTALLNFYTSYGFHSSAHSLFDKMPEKNVVSWTSLMVGYSDNGNPMEVINLYHKMKHEDV
KCNQNTFTTVITSCGSLENESLGLQVLGHVIKSGFEYDLSVSNSLISMFGNIGSIQDACY
VFNQMSTRDTISWNSMISAYARNHSFKESFQCFKFMRHLHEDLDPITLSALLSVCSSMDN
LLYGAAVHGLVHKLGFDLNLSLCNTLLLFYSETGKLKDMVKLFEEMPDKDLISWNTIISG
YIQEGVHLDALKVFVKMLQRQRPVNHVTFSSALSACSNHDFLAEAEILHALVFTSGFHGN
LIVGNALVTMYGKQKMMWQAEKVFERMPEKDLVTWNTLIGGYTECEQPNQTIKAFNFMRK
QNEPINHITLIQVLSSCVTPNQLFSHGKPLHGYLILSGFDSDDYVKNSLITMYGKCNDLD
SSTRIFNGFVNKDYVSWNAFLAANAHGHGEEVLKRFTEMKKNGIHLDQFTLSSALSAAST
LSALEEGQQIHGLTFKSGFDSHQYVTTAVTDMYGKCGEINDVMKMLPEAKIRPIVLWNIL
ISSFARQGLFQEAIEAFHEMVKMGFKPDHVTFVSLLSACSHGGLVDKGLEYYSLMTTKFG
VPIGIEHCVCIIDLLGRSGKLLEAENFIKKMPVPPNDFVWRSLLAACRIHGNLELGKQAL
KHLLESNPLDDSAFVLYSNVCASIGKWDFVHDVRSEMEFGNVKKKPACSWIKMKRKVSSF
AIGDKSHPESGKIYGKLDEIKKMVKESGYVCDMKFALQDIDEEQKEDHLWKHSERLALAY
GLISTPEGSDLQIFKNLRVCGDCHELFKFVSEIVRRKIILRDPFRFHHFRDGKCSCGDYW
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcctgggtatgcaccgagttggtgtcatagctaatcagtttctctactggaac
gctttgacgccatgttcaagcctcaagtctctacatcgtgggatgcaccaatttggagga
accattatctcagtttttttagagaagggtttctcggagatcaccaacgagactgttgga
aaatcactacatgctttttgtataaagaattacctccgtctaagcatattccatacaaat
actttgatcaatatgtactcaaaacacggcaaattcgaagctgctcgctacgtgttcgat
gaaatgcctcagagaaacgaagctacatggaataccatgatctctgctttagttcgagtt
tcattgtactcagacgcctttcttttgttaagtcaaatgcgtgctcaaggatttgagaca
agtggcttcgttatcgctagtttattaaccggatgcactggttcaggctttatgctacat
caaggatttcaaatccatggtttaattttgaaaaacggtttattatataatgtgtatgca
ggaacagcccttctaaacttttatacttcatatggattccattccagtgctcatagtctc
tttgacaagatgccagaaaagaacgtggtatcttggacttcattgatggttggctactct
gataatggaaatcccatggaggtcataaacttataccacaaaatgaagcatgaagatgtc
aaatgtaaccagaacacattcaccactgtgataacttcttgtggatctttggaaaacgag
tcattgggtcttcaagttcttggacatgtcataaaatctggattcgaatatgatctttca
gtgtccaattctcttatatccatgtttggtaatattggtagcatacaagacgcctgctat
gtgttcaatcaaatgagtacacgtgacactatttcatggaactccatgatttctgcatat
gcacgcaatcattcattcaaggagtcctttcaatgctttaaattcatgcgtcatctccat
gaagatcttgatccaattacactttctgcactgttatcagtatgtagctccatggacaat
ctcctctatggtgctgctgttcatggtttggtccacaaactagggtttgatttaaactta
tctctatgcaatacccttttgctattttattcagaaaccggaaagctcaaggacatggta
aagttatttgaagagatgccagataaggatttaatctcatggaatacaataatatctggt
tatatacaagaaggggtgcaccttgatgccttgaaagtgtttgttaaaatgcttcagaga
caaagacctgtaaatcatgtgactttttctagcgcattatctgcttgttcaaaccatgat
tttttagcagaagccgaaatccttcacgcacttgtattcacatctggtttccatggaaac
ctaattgttggaaatgctttagtcacaatgtatggaaagcaaaagatgatgtggcaagct
gaaaaagtctttgaaagaatgcccgaaaaagacttggtgacatggaacactctgattgga
ggatacaccgaatgtgaacaaccaaatcaaacaatcaaagcttttaactttatgagaaaa
caaaatgaacccattaaccacataaccttgattcaagttcttagttcttgtgttactcca
aatcaacttttcagccatgggaaaccattacatgggtatctgattctttctggttttgat
tcggatgattatgtgaaaaattcccttattacaatgtatggaaagtgtaacgatttggat
tcaagtacacgtatttttaatggatttgttaacaaagattacgtttcttggaacgcgttt
cttgctgcaaatgctcatggacatggagaagaggttttaaaaagattcacagagatgaag
aaaaatggaattcatttggatcagtttactctctcttcggctctttctgctgcttctacc
ttgtctgctcttgaagaaggtcaacagattcacggtttgacttttaaatccgggtttgac
tcgcatcaatatgttacgacagctgtcacggatatgtatggaaaatgtggcgagataaat
gatgtgatgaaaatgcttccagaagcaaagattcgaccaatagtgttatggaatattcta
atatcatcatttgcaagacaaggattgtttcaggaagcaatagaagcttttcatgaaatg
gtgaaaatgggatttaagcctgatcatgtcacttttgtttctttgttatctgcgtgtagt
catggaggtttagtagacaagggtcttgaatattattctttaatgacaacaaaatttgga
gttcctattggtatagaacattgtgtttgtataattgatcttcttggaagatccgggaag
cttctagaagctgaaaatttcatcaagaaaatgccggtcccaccaaatgactttgtgtgg
cgaagcttgttagctgcgtgtagaattcatgggaatttagaattgggaaaacaagcgtta
aaacatcttcttgaatcaaatccattagatgattcggcttttgttctttactcaaatgta
tgtgcaagtattgggaaatgggactttgttcatgatgttagatcagaaatggaatttgga
aatgttaagaagaaacccgcgtgtagttggattaagatgaaaagaaaggtgagttctttt
gcgataggggataaatcgcaccctgagagtggaaagatatatgggaaattagatgagatt
aagaaaatggttaaagaaagtggttatgtttgtgatatgaagtttgcattgcaagatatt
gatgaagaacaaaaggaggatcatttatggaagcatagtgagaggttggcacttgcatat
ggattgattagtacgccggaaggttcggatttgcagatatttaagaatcttcgtgtttgt
ggtgattgtcatgagttgtttaagtttgtaagtgagattgtgaggcggaaaattatactt
agagatccttttaggtttcatcattttagagatggtaagtgttcttgtggtgactattgg
tag
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