Lactuca sativa (garden lettuce): 111888322
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Entry
111888322 CDS
T05352
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsv03036
]
111888322
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111888322
REST complex
111888322
Heterochromatin formation proteins
Other heterochromatin formation proteins
111888322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
111888322
NCBI-ProteinID:
XP_023740247
LinkDB
All DBs
Position
3:complement(67873335..67879065)
Genome browser
AA seq
1102 aa
AA seq
DB search
MVDGDLFTGMKRSRDDDDAYSSPQFKRPLISEQSKHKGSTHKLTTNDALTYLEKVKDIFQ
NEKEKYEEFLKVMKDFKTQRIDTTGVIARVKELFKGHQDLLLGFNPFLPKGFQITLPLDD
EQHHVKKPLEIEEAILFVNKIKMRFQGQDHVYKYFLDTLNKYKKENKSIKEVHQEVAALL
NDQQDLLKEFTNFLPDSSHTECKVNVDQPDPDHEKACTIPDKENKAHGEKQKDTSEDTEQ
REHDQDDKDCDVTHHFTQNKPPRTLEDSVAELFHQDVHGQMLCLREKVKERLSNSDDYQS
FLKCIAEYCTESITRPQLQSRVNSLLGAYPDLVEEVNEFIDRSEKTRSLWSDGHLPGVIK
GNDGGKDGNSDGDEMDKNSSAIKEKYLTKSIQELDLSDCECCTPSYRLLPKNYPIPSASQ
RTKIGYEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTAKR
VEELLDRINDNSIKKTENVVHIEDFTAINLRCIGRLYGDHGLDVMDVLRKNASLALPVIL
HRLKQKQEEWLRCRSDTKKVWAEIYAKNYHKSLDHRSFYFKQQDSKSLSAKALLAEIKET
SEEKSIDDHILQSIAPGKKQNNIPHQEFKYSDLIIHEDLYQLMKYSVTQSASSEQTDKSV
KIWTTFVEPMLGVPPRSTSTVDQAKTTNRGSSMRSNDNININNNGVKENGEFSPNGDFKR
GSSRRSLDDNSENAFDSGSESADAEDHSPYVDHGNNGGSDGVVDALGDDTCPFSEHILKR
VKPLMLHVPESLQSKEKKSRVFYGNDDFYVFFRLHQILYSRLEEAKEKSLVEKWRGSNDA
TPNDSYARFLDLLYSFLDGAIDSAKYEDECRAVLGTWSFPVFTLDKLIDKLTKLLLAIAT
DEVNNKLLDLYAYENLRKGERFVDELYNANASVIVNDSKIFRFECSSIPETYRHTRLTIQ
IINFAYEKSEPPASLMDPNFAAYLNTQLLSVDHRRKRHRIFLKRNKRKNGCGDDDSAMAK
AMEGFHIVNGLEFKIAAFTYKVYYVMGTSDSLVRKGRKRVNNNNRMVSREVGNGNISISN
AHSLKALKFLKFLFSRIQSMGT
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggttgacggtgatctgtttacagggatgaagcggtctagagatgacgatgatgcttac
agcagccctcagttcaagcggccattgatttctgaacaatccaagcacaaaggcagcact
cataaattgacgactaatgatgccctaacatatctagagaaagttaaagatatattccaa
aatgaaaaggaaaaatatgaagagtttcttaaagtcatgaaagatttcaagacccaaaga
attgacaccacaggtgtcatagcacgggtgaaggaattgttcaaagggcaccaggaccta
cttttgggtttcaatccctttcttccaaagggatttcagatcaccctcccactagatgat
gaacaacaccatgttaagaagcctttggagattgaagaagccattctatttgtaaacaaa
attaagatgagatttcaaggtcaagaccatgtgtacaaatattttcttgatactttgaat
aagtacaaaaaagaaaacaaatccatcaaggaagttcaccaagaggttgctgctcttctt
aatgatcaacaagacctgctaaaggagttcaccaatttcttacctgattcttctcatact
gaatgcaaagtcaacgttgaccagcctgatccagatcatgaaaaagcatgtactatacct
gataaagagaataaggcacatggtgagaaacaaaaagacacatcagaagacacagaacaa
agagaacacgatcaagatgataaagattgtgatgtgacacatcatttcactcaaaataaa
cccccacgtactcttgaagactctgtagctgaactctttcatcaagatgtacatggacaa
atgctttgtcttcgtgagaaggtgaaggaaagattgagcaactcagatgattaccagtca
ttcttgaagtgcattgcagagtattgcacagaaagtatcactcggccacaactgcaatca
agggtaaatagtttgcttggagcatatccggatcttgtggaagaagtcaatgagtttata
gatcgcagtgaaaagacaagatctttatggagtgatggacatttacctggagtaataaag
ggtaatgatgggggtaaagatggaaattctgatggagatgaaatggacaagaatagttca
gccatcaaggagaagtatctaacaaaatcgattcaagaacttgacctttctgactgtgaa
tgctgcactccaagttatcgccttttaccaaaaaactacccaattccttcagcaagccaa
agaacaaagattggttatgaggtgttgaatgatcattgggtgtctgttacttctggaagc
gaagattattctttcaaacacatgcgtaaaaaccaatatgaagaaagcttatttcgatgt
gaagatgacagatttgaactggacatgttactagaatcagtgaatgtaacagcaaaacgt
gtggaagaactattagacaggattaatgataattcgattaagaagacagagaatgtggtt
catatagaagactttacagctataaatctgagatgcattgggcgtttatatggtgatcat
gggcttgatgtgatggatgtattaagaaagaatgcatctcttgctttaccagttatatta
catcgtttgaaacagaagcaagaagaatggctgaggtgtcgatccgatactaaaaaagtt
tgggctgaaatttatgctaaaaattatcataaatcactcgatcatcgtagcttttatttc
aaacaacaagattcaaagagcttgagtgctaaagctttattggctgaaattaaggaaaca
agtgaagaaaagtctatagatgatcatatccttcagtctattgctcctggaaaaaaacaa
aacaatattccacatcaagaatttaagtactctgatttaatcatccatgaagatttatat
caactcatgaaatattctgtcacacaaagtgcttcctctgaacaaacggataaatccgtg
aagatctggactacttttgttgagcctatgcttggtgttcctcctcggtcaacatccaca
gttgaccaagcaaaaacaaccaatcgtggttcttccatgagatccaatgataacattaac
attaacaacaatggtgttaaagagaatggtgaattttcaccaaatggagattttaaaagg
ggtagtagccgaaggtcattagatgataatagtgagaacgcttttgattcaggaagtgaa
tccgctgatgcggaggatcactccccgtatgtagaccatggtaacaatggtgggagtgat
ggtgtggtggacgcattgggtgacgacacctgtccgttttctgaacatattttgaaaaga
gtgaaaccgcttatgcttcatgttcctgaatctttgcaaagtaaagaaaaaaagtcgagg
gtgttttacggaaatgatgacttttatgttttcttcagacttcatcaaatattgtactca
aggctagaggaggcaaaggaaaagtctctagttgaaaaatggaggggttcaaatgatgca
acacctaatgattcatacgctagattcttggatctactgtatagttttcttgatggtgct
atcgacagtgcaaaatatgaagatgaatgtcgggctgttcttggcacgtggtcgtttcct
gtcttcacattagacaaactgatcgacaagcttacaaaattgctgctagcgattgcaacg
gatgaggttaataacaagcttcttgatctttatgcgtatgagaatttgagaaaaggggag
agatttgtggatgaactttataatgcaaatgcaagtgtgattgttaatgactcaaagatc
ttccggtttgagtgttcatctatccctgaaacatatagacatacgcgattaactatacaa
ataataaactttgcatatgaaaaatctgaacctccagcttctttgatggacccaaatttt
gcagcatatttaaacactcaactcctttcagttgatcataggagaaagaggcacaggatc
ttcttgaagaggaacaagagaaaaaatgggtgtggagatgatgactcagcaatggcaaag
gccatggaaggttttcatatagtcaatgggcttgagttcaagatagctgcctttacatat
aaggtgtactatgttatgggtacatcggattctttggtgcgaaagggaagaaaaagggtg
aacaataataatcgtatggtgtctcgtgaagttggtaatggtaatatttcaatttcaaat
gctcattctcttaaagcattgaagttccttaagtttttgttctcaaggattcaatccatg
ggaacatga
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