Lactuca sativa (garden lettuce): 111893046
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Entry
111893046 CDS
T05352
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111893046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111893046
04147 Exosome [BR:
lsv04147
]
111893046
04090 CD molecules [BR:
lsv04090
]
111893046
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111893046
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111893046
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111893046
CD molecules [BR:
lsv04090
]
Proteins
111893046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_22
AAA_29
RsgA_GTPase
AAA_21
AAA_15
AAA_5
nSTAND1
DUF87
AAA_25
APS_kinase
Rad17
Pox_RNA_pol_35
Motif
Other DBs
NCBI-GeneID:
111893046
NCBI-ProteinID:
XP_023744885
LinkDB
All DBs
Position
1:65253408..65259507
Genome browser
AA seq
1324 aa
AA seq
DB search
MRSEASEEKIKRRREQLEWFEMQSLELVSENPSPPLGSSSSQNKETMEMEGENSKNAEKD
KGVSVGFGELFRFADRLDYVLMGIGTIGAFVHGCSLPIFLRFFADLVNSFGSNVNNIDKM
TDEVLRYAFYFLIVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALSQDIQFFDTEV
RTSDVVYAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIA
IIGAIHTITLAKLSSKSQEALSEAGNIAEQTIAQIRTVLAYVGESRALQAYSSALKISQK
LGYKTGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAISTMFSVMIGGLALG
QSAPSMSAFAKARVAAGKIYRIIDHKPSVDKNSESGLELDSVSGQLELKNIEFSYPSRPD
VKILNNFTLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKGLNLRWL
RQQIGLVSQEPALFATTIKENILLGRPDAYMGEIEEAARVSNAHSFIIKLPDAYDTQVGE
RGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIA
HRLSTIRKADLVVVLQQGSVSEIGTHDDLMSKGENGVYAKLIKMQEVAHETAMNNARKSS
ARPSSARPSSARNSVSSPIMTRNSSYGRSPFSRRLSDFSTSEFSLSVEGGYPNYKLEKLP
FKEQASSFWRLVKMNSPEWSYALVGSVGSVVCGSLSAFFAYVLSAVLSVYYSQDHEYMIK
QIGKYCYLLIGVSSAALIFNTLQHSFWDVVGENLTKRVREKMLAAVLKNEMAWFDQEENE
SSRVAARLALDANNVRSAIGDRISVIMQNSALMLVACTTGFILQWRLALVLVAVFPVVVA
ATVLQKMFMQGFSGDLEGAHAKATQLAGEAVANMRTVAAFNSESKIVDLFKTSLDTPLRR
CFWKGQIAGQGFGIAQFLLYGSYAIGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAE
TLTLAPDFIKGGRAMQSVFELLDRKTEIEPDDQDSTTVPDKIRGEIELKHIDFAYPSRPD
TLIFRDLSLRARAGKSLALVGPSGCGKSSVISLIQRFYDPSSGRVAIDGKDIRKYNLKSL
RRHIAVVPQEPCLFATTIYENIAYGHETATEAEIIEAATLANAHKFISALPSGYKTFVGE
RGVQLSGGQKQRVAIARAFLRKAEIVLLDEATSALDVESEKCIQEALERVCLGKTTIVVA
HRLSTIRNVHSIAVIDDGKVVEQGSHSHLLKTYVDGCYAKMIQLQRFSHGHEVVNMASIG
SSSS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcagaagcatctgaggagaagataaagagaaggagagagcagttggaatggttc
gaaatgcaaagtcttgaacttgtctctgaaaacccaagcccacccttgggttcttcttct
tctcaaaacaaagaaaccatggaaatggaaggagagaatagtaaaaatgcagagaaagat
aagggtgtttcagtaggatttggagagttatttagattcgcagatagattagactatgtg
ttaatgggtattggaacaattggtgcctttgttcatggttgttcgttacctattttcctc
agattctttgctgatcttgtcaattcatttggctccaatgtcaacaacattgataaaatg
actgatgaagtgttaaggtacgcattttactttcttatagttggagctgcaatttgggca
tcttcatgggcagagatatcatgttggatgtggacaggagagagacaatcaacaaaaatg
aggatcaaatatcttgaagcagcactgagtcaagatattcagttctttgacactgaagtc
agaacttcagatgttgtatatgcgatcaatactgatgctgttatggttcaagacgccatt
agtgaaaagctagggaattttatacactatatggcgacatttgtatctggatttgtggtg
ggattcacagcagtttggcaattggcgcttgtgacacttgcagtggtgcctttaattgcg
ataattggagctattcatacaattacattagcgaaactgtcttctaagagtcaagaagct
ctttcggaagctggaaatattgctgagcagacaatcgcacaaattcgaacagttttagca
tatgttggtgaatcaagagcattacaagcctactcttctgcattaaagatctcacagaaa
ctcggatacaagactggattttcaaaaggattaggattaggagcaacttatttcacagtc
ttttgttgctatgctcttcttctatggtacggaggatatcttgttcgtcaccattacacc
aacggaggtctcgccatttccaccatgttctccgtcatgatcggtggcctagctttaggc
caatcagctccaagtatgtctgcgtttgcgaaagcacgagtagcagcgggtaaaatctat
agaattatcgatcataaaccgagcgtcgacaaaaactctgaatcgggattggaattggat
tccgtttccggccaattagagctgaaaaacatcgaattttcatacccttcaagaccagat
gttaaaattctaaacaatttcactctaactgttcctgccggaaaaacaattgcattggtc
ggaagcagtggttcagggaagagcacggtggtttctctaattgaaaggttctacgatccc
acctcaggacaagtaatgcttgatgggcatgacataaaaggtctaaatttgcgatggtta
aggcaacaaattggtctagttagccaagaacctgcactttttgcaaccaccattaaagag
aatatcctcttgggtcgacccgatgcatacatgggtgagattgaagaagctgcacgtgtg
tcaaatgctcattcgttcattatcaaattaccagatgcctatgatactcaggttggggag
agaggattacaattatcgggtggacaaaagcagagaatagcgatagcaagagcaatgtta
aagaatccagcgatcttgcttttagatgaagctacaagtgcattggattcagaatcggaa
aagttagtgcaagaagccctagacaggttcatgatcggaagaacaactctggtgatcgcc
caccgtctctccaccatacgaaaggcggatctcgtggtggttctgcaacagggtagtgtt
tcagaaatcggaactcacgatgatctgatgagcaaaggcgaaaatggcgtctacgcgaag
ctcataaaaatgcaggaagttgcacatgaaaccgccatgaataacgccagaaagagcagt
gcgagaccttcgagtgcgagaccttcgagtgcgagaaactcagtgagttcacctataatg
actcggaactcgtcgtatgggagatcgccgttttcccggaggttatctgatttctcgacg
tcggaatttagtttatcagtcgagggaggttaccctaactacaaactcgagaagcttcca
tttaaagagcaagcaagttcgttctggcggctggtgaagatgaactcgccggagtggagc
tacgccttggttgggtcggtgggttccgtcgtttgtgggtccctcagtgcattctttgct
tacgttctcagtgcagtgctcagtgtttactacagccaagaccatgaatacatgattaaa
cagatcggaaaatactgttatttattgatcggcgtgtcatcggcggctcttattttcaac
accttgcagcattctttctgggatgtcgtcggagaaaatttaacaaaacgtgttcgcgag
aaaatgctagcggcagttttaaaaaatgaaatggcatggttcgatcaggaggagaatgaa
agctcgagagtcgccgctaggctagctctagatgccaataatgtcaggtcggcaattggt
gaccggatttctgtaatcatgcagaactccgccctcatgttggtggcctgcaccaccgga
tttattctccaatggcgtcttgctcttgttcttgttgctgtgttccctgtcgttgttgca
gcgactgttttgcagaaaatgttcatgcaaggattttccggcgacttggaaggtgcacac
gcgaaggccacccaactcgccggagaggcggtggctaatatgagaacagtggcggcgttc
aactcagagtcaaaaatagtcgacctttttaaaaccagtcttgataccccacttcgtaga
tgcttctggaagggacaaatagccggacaaggattcgggatcgcccaattcttgctatat
ggttcatacgcgatcggtctttggtacgcttcatggctcgtaaaacacggaatctctgat
ttctcaaagacaattcgcgtgttcatggttctcatggtgtcagccaatggtgcagccgaa
accctaaccctagctcctgatttcatcaaaggcggtcgagccatgcagtctgtgttcgaa
cttctcgatagaaaaaccgagatcgaaccagacgatcaggactcgaccacagtgcccgac
aagatccgaggcgaaatcgaactaaaacacatcgatttcgcctacccttcccgcccagac
actttaattttccgtgatctttctttacgcgcccgggccgggaagagtctcgctctggtc
ggcccaagtggttgcgggaagagctcagtgatctccctgatacaacgattctacgacccg
tcctctggacgggtcgcaatcgacggaaaagacatccgtaaatataacctaaagtcactg
cgtcgtcatatcgcagtggtcccgcaagagccctgtctctttgccaccacgatatacgaa
aacattgcgtacggacacgagacggcaacagaggcagagatcatcgaggcggccaccctg
gcgaacgcccacaagttcatatctgcattaccttccggatacaaaacatttgtgggcgaa
cgcggggtgcagctctcgggcgggcaaaagcaacgggtggcaatcgcgagggcgtttttg
agaaaagcggaaattgtattactagacgaggctacaagtgcgttagatgtggagtcagag
aagtgtattcaagaagcgcttgagcgtgtgtgtttggggaaaacaacaattgttgttgcg
cataggttgtcaactatacgaaatgttcatagtattgcggttattgatgatgggaaagtg
gtggaacaagggtcgcattcacatttgttgaagacttatgtggatggatgttatgcgaag
atgattcaattgcagagattttcgcatgggcatgaggttgtaaacatggcttccattggt
tcgagttcatcctaa
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integrated database retrieval system
