Lactuca sativa (garden lettuce): 111901292
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Entry
111901292 CDS
T05352
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111901292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111901292
03051 Proteasome [BR:
lsv03051
]
111901292
Membrane trafficking [BR:
lsv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111901292
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111901292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Dsc3_N
UBA
Ubiquitin_5
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
111901292
NCBI-ProteinID:
XP_023752916
LinkDB
All DBs
Position
3:complement(100185155..100187967)
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AA seq
412 aa
AA seq
DB search
MEGGGEANEGGGSDVVTINIRFSACKKIVVHVSLDSSVESLKSVIAKNSDVRVEEQRLIN
NGRLLKDDRTLRSYDLEAEHIVYLIRVYIPVASEDDTTSGSDTSSPSTTESETMSGYRYL
SPSTIDFSAIPGVEPIQLPWVQNSDMSQEMMDHLITNPDAVRNMAINTPESREAIDRDPD
LARIFNDPVIFRSMAESAVISEVIARVGGAGSGGGGGGGTPSHLAGTDSSAPPVDLGGPE
IPGLERMLGFTPDPIAMSQLMQSPAMSQFIQRLLSNPHNMNPILNPQYREIMQNPVLTSQ
SQLTSPETMQEMLALHQTLSYVLGEEPITRWDAGQTSGGTGTQSQPFSGEGTSGSTPPNN
NLNNVGPEEVLYASELAQLEAMGFHDTRKNLEALTATKGNVPAAVDRLRGSQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggaggcgaggcaaatgagggtggcggaagtgacgttgtcaccattaacata
cgtttttctgcctgcaagaagatcgtcgttcacgtgagcctggattcgtctgtcgaatcg
cttaagtctgtgattgcaaaaaactctgatgtgcgtgtggaagagcagcgtttgatcaat
aacggccgccttctcaaagacgatcgcactcttaggagctatgatttggaggcagagcac
attgtttacttgattcgtgtttatattcctgttgcatctgaagacgatacaacgagtgga
tctgatacttcatcaccttctacaactgaatcggaaacaatgagtggttatcgttattta
tcaccttctacaattgattttagtgcaattccaggggttgaaccaatacagctaccatgg
gttcagaattccgacatgagtcaagaaatgatggatcatctaatcactaatccagatgct
gtacgcaacatggcaatcaatactcctgaatcgcgtgaagctattgatagggatccagat
cttgcacgcatattcaatgatcctgtcatcttccgtagcatggctgagtctgcagtcatc
agcgaagtgatagccagagttggtggtgctggtagcggcggaggtggtggtggtggtact
ccaagtcaccttgctgggactgatagctctgcaccacctgttgacttaggtggacctgag
attccaggtctagaacgaatgttaggttttacccctgatcccattgcaatgagtcagctt
atgcaaagtccagctatgtcacagttcattcagcgtctcctttcaaacccacacaacatg
aatccgatactcaatccccaatacagagagataatgcaaaaccctgtcctcactagtcaa
agtcaactgacttcaccagagaccatgcaggaaatgttggcattgcatcaaactctttcc
tacgtacttggtgaggaaccaatcaccagatgggatgcaggtcaaacaagtggaggcaca
ggaactcaatctcagccttttagtggagagggaacatcaggctcaacaccacccaacaac
aacttgaataatgtgggcccagaagaagtgttgtacgctagtgaacttgcacaactagag
gcaatgggttttcatgatacccgtaagaatctagaagctttgaccgccaccaaaggtaac
gttcctgctgctgttgaccgcctacgtggcagtcaatag
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