Lactuca sativa (garden lettuce): 111901842
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Entry
111901842 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: protein rough sheath 2 homolog
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111901842
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111901842
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
GTP_EFTU_D3
Motif
Other DBs
NCBI-GeneID:
111901842
NCBI-ProteinID:
XP_023753469
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Position
4:complement(330038957..330040360)
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AA seq
388 aa
AA seq
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MKERQRWQPEEDALLRAYVNQYGPREWNLISQRMSKPLDRDPKSCLERWKNYLKPGIKKG
SLTPQEQTLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFKEKQIKQQIQNNKKSGS
STSNPPPPPPSVAVVSGCCGSPEKAIQGTYDHILETFAEKYVQPYLKPAPVVMPNLNSPI
LSLGSGSNPTPDPNVTAPMLPPWMNNNNTTSCLTSSSSSKSTTPSPSVSLTLSPSEPVVL
DPVHSDHPLNTRFFPVQQVGTLVQCCKEVEEAKQNWVQHKKEATWRLSRLEQQLEAEKSR
KRREKMEEIEAKIRCLREEETAALGRMESEYREQLNALQRDAEGKEVKLMESWSNKQMKL
SKLVEQINGGLIQHQHMISGTNHHHGLS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcgtcaacgatggcagcctgaagaagacgctctcctccgtgcttacgttaac
cagtacggccctcgagaatggaatctcatctctcaacgcatgtccaaacccttagatcgt
gatcccaaatcgtgtctcgagcgttggaagaattatctcaaacccggaatcaaaaaagga
tcgcttacaccacaagaacagacactggtgatttcacttcaggccaagtacggaaacaag
tggaaaaagatcgcctccgaagtccctggccgaacagctaagcgtttaggaaagtggtgg
gaggttttcaaggaaaaacaaatcaaacagcagattcagaataataagaagtccggatcg
tcgacttcgaatccgccgccgccgccgccgtctgttgcggttgtttccggttgctgtggt
tcgccggaaaaagctattcaaggtacgtacgaccatatactggagactttcgcagagaag
tacgtgcaaccgtacttgaaaccagctccggtggtgatgccaaatctgaactcaccgatt
ctttcactcggttccggttcaaatccgacacccgacccgaatgttacagcgccaatgtta
ccaccatggatgaataacaacaatacgacgtcgtgcttaacatcatcttcttcctcaaag
tcaacaacgccatctccatcggtgagcctcaccctctccccctccgaaccggttgttctc
gacccggttcactccgaccatccactcaacacccggtttttcccggttcaacaagtgggt
acattggttcagtgctgtaaagaggtggaggaagcaaagcaaaactgggttcaacacaag
aaggaggcgacatggcggctgagccggctggaacagcagctagaagcggagaaaagccgg
aagagaagagagaagatggaggagatagaagcgaagatacggtgtctgagggaggaggag
acggcggcgttagggcggatggagagtgagtacagagaacagttgaatgcgttgcagagg
gatgcagaagggaaagaagtgaagttaatggaatcatggagtaataagcaaatgaagttg
agtaagcttgttgaacagattaatggcggattaattcaacatcaacatatgattagtgga
actaatcatcatcatggtttaagttaa
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