Lactuca sativa (garden lettuce): 111906809
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Entry
111906809 CDS
T05352
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111906809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111906809
04147 Exosome [BR:
lsv04147
]
111906809
04090 CD molecules [BR:
lsv04090
]
111906809
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111906809
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111906809
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111906809
CD molecules [BR:
lsv04090
]
Proteins
111906809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
ABC_ATPase
AAA_22
AAA_21
Zeta_toxin
AAA_15
nSTAND1
DUF87
AAA_30
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
111906809
NCBI-ProteinID:
XP_023758360
LinkDB
All DBs
Position
4:397787759..397795640
Genome browser
AA seq
1252 aa
AA seq
DB search
MAETTEASKAMPAQAEKRKEQSIPFYQLFSFADKFDYALMILGSIGAIIHGSSMPFFFLL
FGQMINGFGKNQSDLNTMTHEVSKYALYFVYLGLVVCISSYAEIGCWMYTGERQVSTLRK
RYLEAVLKQDVGFYDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF
VSAWKLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYV
GETKALDSYSDAIQHTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDG
GKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLLEIIKQKPTIVQDSTDGKCLTEV
NGNIEFKEVSFSYPSRPDVLIFKEFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQ
GQILLDDVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPNATTSEVEAATSAAN
AHSFITLLPNSYNTQVGERGIQLSGGQKQRIAIARAMLKNPKILLLDEATSALDSASENI
VQEALDRLMVGRTTVVIAHRLSTIRNVDSIAVIQQGQIIETGTHEELISRPGAYSSLIRF
QEMIGNRDFSNPSMTHRTRSSRLSNSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNA
ETDRKNGAPSGYFFRLLKMNAPEWPYSIMGAIGSILSGFIGPTFAIVMSNMIEVFYFDNP
ARMERKTKEYVFIYVGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLSAIMRNEVGWFD
EEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFVVAFIVEWRVSLLILATF
PLLVLAHFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILSLFSDELR
LPQTQSLRRSQLSGILFGISQLSLFASEALILWYGAHLVTKGLSTFSKVIKVFIVLVITA
NSVAETVSLAPEIIRGGEAIGSVFSILDRQTRIDPDDPDSDVVDTVRGEIELRHVDFSYP
SRPDVPVFKDFSLRIRSGQSQALVGPSGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN
LKSLRLKIGLVQQEPALFAATIMENIAYGKAGATEAEVIQAATAANVHTFVSGLPEGYNT
PVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQDALERLMRGRTT
VLIAHRLSTIRGVDSIGVVQDGRIVEQGSHGELISRPEGAYSRLLQLQQHRM
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgacggaggcgtccaaggcaatgccggcgcaagcagaaaagagaaaggag
cagagtattcccttctaccaactgttttcattcgcggacaagttcgattacgctctcatg
attttaggtagcatcggtgccattattcacggatcttccatgcctttcttcttcctcttg
ttcggacaaatgattaatggcttcggaaaaaaccaatcggatttgaacaccatgactcac
gaagtttcaaagtatgctctgtatttcgtctatctcggattggtagtgtgcatatcgtca
tacgcagaaatcggatgttggatgtacaccggagaaaggcaagtgagcacgttgaggaag
agatatttggaagcagttttaaaacaagacgttggattttacgatacagatgcaagaaca
ggagatatcgtttttagtgtctccactgatactctacttgtccaagacgccattagtgag
aaggtgggaaactttatccattatctctcgacatttttggctggattggttgttggtttc
gtttccgcatggaagctagctcttctaagtgttgcagtgatccccggaatcgcatttgca
ggtggattatacgcttatactcttacaggtctcacttccaaaagccgtgaatcctatgcc
aatgctggcatcatcgctgaacaggcaattgcacaagtaagaacagtgtattcatatgtg
ggagaaaccaaagcactcgattcatattcagatgcaatacaacacactctcaaattggga
tacaaagcaggaatggcaaaaggattgggattgggatgcacatatggaatcgcatgcatg
tcatgggcacttgtgttttggtatgcgggtgtgtttattaggaatgggcaaacagatggt
ggaaaagcatttacagcaatcttctccgccattgttggtggcatgagtttgggtcagtcg
ttttcgaatcttggagcattcagcaaagggaaagctgctggatataaattattggaaatc
attaagcaaaaaccgactatagttcaagactctactgatgggaaatgtttgaccgaggtc
aacgggaatattgaatttaaggaggtgtcttttagttacccttcaaggcccgatgttctt
atctttaaagagttttccattttcttcccggctggaaagacagttgcggtggttggtggt
agtgggtccggtaaaagcacagttgtttccctaatcgaacggttttatgaccctaatcaa
ggacaaatcttgctagatgacgtggacatcaaaaccctccaactaaaatggcttcgcgac
caaatcggtctagtcaaccaagaacccgcactcttcgccaccacaatcctcgaaaacatc
ctctacggaaaacccaacgccaccacatccgaagtggaagccgccacgtcagccgccaac
gcgcattccttcatcaccctcctcccaaacagctacaacacccaagtcggcgaacgcgga
atccaactttccggtggtcaaaaacaacgcatcgcaatcgcaagagccatgttaaaaaac
cctaaaatcctcctcttagacgaggccacatcagcactcgattccgcctccgaaaacatc
gtccaagaagccctcgaccgcttgatggtcggaagaaccaccgtagtaatcgcgcaccgc
ctttccaccattagaaacgtcgattccatcgcggtaatccaacaaggacaaatcatcgaa
accgggacccacgaggaacttatttcccgcccaggggcgtattcgtcattaatccggttc
caagaaatgatcggaaaccgcgatttttcaaacccgtcgatgactcaccggacgcggtca
tcgcggttgagcaattcattgtctacaaaatctttaagtcttcgatccggaagcttaagg
aatttgagttatcagtatagtacgggtgcggatgggcggattgaaatgatatcgaatgcg
gaaacggatcggaaaaacggagctccgagtgggtatttttttaggcttttgaaaatgaat
gcacccgagtggccgtattcgattatgggtgcaattgggtcgattttatccgggtttatt
ggtccgacttttgcgattgtgatgagtaatatgattgaggttttttactttgataaccct
gcgagaatggagagaaagacaaaagagtatgtttttatatatgttggagctggtttatac
gcggttgttgcgtatttaatccaacattatttctttagtatcatgggtgagaatctcact
acacgagttcgaagaatgatgctttcagcgataatgagaaatgaagttgggtggtttgat
gaagaggagcataactcgagtctagtggcagcgaggttagcaacagatgcagcagacgtg
aaatccgcgatagctgagaggatctctgttatattacagaacatgacgtcacttctcacg
tcatttgtagtcgctttcattgtcgaatggagggtttcacttctgattctcgctactttt
cctcttcttgttctcgcccattttgcccagcaactttctctcaaaggcttcgccggagac
acagcaaaagcccacgcaaaaacaagcatgatcgccggagaaggagtaagcaacatcaga
acagtagcagccttcaacgcccaagacaaaatcctctccctattctccgacgaactccgt
ctcccccaaacacaaagtcttcgccggagtcaactttccggcatcctattcggcatctca
cagctctctctcttcgcatcagaagccttaatcctgtggtacggcgcccacctcgttacc
aaaggcctctccaccttctcaaaagtcatcaaagtcttcatcgtgttggtgataactgca
aactcggtagctgagactgtcagcctcgccccggaaatcatccggggtggtgaagccatc
ggttcggttttctcgatcctcgatcgacaaacccgaatcgacccagacgatcccgattcc
gacgtggtcgacactgtccggggagaaatcgagcttcgtcatgtcgatttctcgtacccg
tcgagaccggatgttcctgttttcaaagacttcagtctgagaatccggtccggtcagagc
caggctctggtcggaccgagcgggtcgggaaaaagctcggtcatcgcattgatcgagcgt
ttctacgacccgactgctggaaaagttatgattgacggaaaagatatccgacggttaaac
ctaaaatctctccggttaaaaatcggtctagtccaacaagaacccgcgttattcgccgcc
acgataatggaaaacatcgcgtacgggaaagccggagccaccgaggcggaggttatccag
gcggcaaccgccgctaacgtccatacatttgtttccggcttgccggaaggttacaatact
ccggtcggcgaacgcggtgttcaactctccggcgggcaaaaacaaagaatcgcgatcgct
cgagccgttttaaaaaatccagcgattctgttactagacgaagcgacgagcgcattggac
gctgagtcagagtgtgtccttcaggatgcactcgagcggttgatgaggggtaggacgact
gtccttattgcacaccgtctgtcgaccatcagaggggtcgacagtattggtgtggttcaa
gatgggaggattgttgaacaaggtagccatggggaacttattagccgacccgaaggggct
tactctaggctcttgcaactacaacaacatcgtatgtga
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integrated database retrieval system
