Lactuca sativa (garden lettuce): 111908773
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Entry
111908773 CDS
T05352
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111908773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111908773
04147 Exosome [BR:
lsv04147
]
111908773
04090 CD molecules [BR:
lsv04090
]
111908773
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111908773
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111908773
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111908773
CD molecules [BR:
lsv04090
]
Proteins
111908773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_15
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_30
DUF87
DUF815
DEAD
AAA_24
AAA_7
DLIC
nSTAND1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
111908773
NCBI-ProteinID:
XP_052623558
LinkDB
All DBs
Position
9:complement(478225..484042)
Genome browser
AA seq
1290 aa
AA seq
DB search
MSSGGKGKEKDEPSNSTTTTDGADGDGDGLQPEQESRSNRKKEKETPNANSVPFYKLFAF
ADSTDYMLMIAGTIGAIGNGACMPLMTILFGDLIDSFGENQNNDDVVRVVSKVSLKFVYL
AIGAGLAAFFQVSMWMVTGERQAARIRNLYLKTILRQDVSFFDKETNTGEVVGRMSGDTV
LIQDAMGEKVGKFTQLLATFVGGFVIAFVKGWLLTLVMLTSIPPLVISGGMMSLLISKMA
SRGQTAYAKAANVVEQTIGSIRTVASFTGEKKAVADYNKSLVDAYKSGVNEGLAAGLGFG
TMMLIVFCSYALAVWYGAKMILEKGYTGGDVVNVIFAVLTGSMSLGQASPCLSAFAAGRA
AAYKMFETINRKPEIDAYDTKGKVLSDIRGDVELKDVYFSYPARPDEEIFSGFSLFIPSG
TTAALVGESGSGKSTVISLIERFYDPKAGEVLIDDINLKQFQLKWIREKIGLVSQEPVLF
ASSIKDNIMYGKDGASMDEIRVAVELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIA
IARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTIIVAHRLSTVRNADMIAV
IHRGKMVEKGSHLELVKDPEGAYAQLIKLQEVSRDSRKQQLGSEDPPTPSSDNKRYLRSI
SRGSSSSIGNSSRHSISNSFGMPTQLAVAAESMDVEAASDEEKAAPKVPLRRLAYLNKPE
IPVLIMGTIAAIVNGAVLPVFGILISSMIKTFYEPPHKMKKDARFWALMYVVLGVVSFLA
YPGRSYFFSIAGSKLIRRIRSLCFEKVIRMEVGWFDKPENSSGAIGARLSADAASLRGLV
GDALAQLVQDSSSAAAGLAIAFVACWQLALIMLALIPLIGLNGFVQVKFMKGFSADAKMM
YEEASQVANDAVGSIRTVASFCAEEKVMQLYRNKCEGPKKAGIQQGLISGIGFGVSFFLL
FCVYAASFYAGARLVEAGKTTFSDVFRVFFALTMAAIAVSQSSSFAPDTSKAKTSAVSVF
AILDRKSEIDPSDESGTTLDNVKGEIELRHISFKYPTRPDVQIFRDLCLTIHSGKTVALV
GESGSGKSTVISLLQRFYNPDSGSITLDGIEIQKFQLKWLRLQMGLVSQEPILFNDTIRS
NIAYGKDGDATESEIIAASELANAHKFISSLHQGYDTVVGERGVQMSGGQKQRVAIARAI
VKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKGADVIAVVKNGV
IVEKGKHEKLINIKDGFYASLVALHMTAST
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggtggtaaaggaaaggaaaaggacgagccctctaactccaccaccaccacc
gacggcgctgatggtgatggtgatggtttacaacctgaacaagaatcccgatcaaacagg
aaaaaagaaaaagagacccccaatgccaatagtgtcccattctacaagctgtttgctttt
gctgattccactgattacatgctgatgatcgctggtaccataggcgccatcggtaatgga
gcttgcatgcccctcatgactattcttttcggcgaccttatagattcttttggtgagaac
cagaataacgacgatgtcgtccgtgttgtttccaaggtatcgctgaaatttgtttacctg
gctattggggctggtttggcagccttcttccaggtgtcaatgtggatggtaacgggagaa
agacaggctgcaagaataaggaatctgtatctaaaaaccatattgagacaagatgtgtcc
ttctttgacaaggaaacaaacacaggggaggttgttggcaggatgtctggggataccgtc
ctcatacaagatgccatgggggaaaaggttggaaaattcactcagctactggcaacattt
gtgggaggttttgtgatagcatttgtgaagggatggcttcttacgcttgtcatgttaacc
tcgattcctccattggtgatttctggtggaatgatgtcactacttatatccaagatggca
tcacggggacaaaccgcttatgctaaagcagccaatgtagtcgaacagacaatcggctca
atcaggacggttgcttcgttcaccggggagaaaaaagctgttgcggattacaataaatcg
cttgtagatgcttacaagtctggtgtgaatgaaggcctggctgctgggcttggttttgga
acgatgatgttgatcgtgttctgtagttatgccttggctgtttggtatggtgcaaagatg
atactggaaaaaggctacaccgggggggatgtggtcaacgtaatttttgcagtgctcacc
ggatccatgtctcttggtcaggcgtctccctgtttgagtgcatttgctgctggccgagca
gcagcatacaagatgtttgaaaccataaacagaaagcctgaaatagatgcatacgacaca
aaagggaaagtactgagtgatatccgtggtgatgtggagttaaaggatgtgtattttagt
tatcctgcaagaccagatgaggaaatatttagtggcttctctcttttcatccctagtggg
acgactgcagctttggtaggagaaagtggaagtggaaagtcaactgtgatcagcctgatt
gagagattttatgatcctaaagcaggggaagttctcatcgatgatattaatctcaaacaa
ttccagctgaaatggataagggagaaaattggtcttgttagccaagaaccggtcctgttt
gcatccagcatcaaggataacatcatgtacgggaaagatggtgcgtctatggatgagatt
agagttgcggtcgagctagcaaatgctgctaaatttatcgataaactacctcagggcctg
gacaccatggttggtgagcatggaacacagctttctggtggacagaagcaaagaattgcc
atagccagagcaattcttaaagatcccagaatcctactccttgatgaagcaacaagtgca
ctggatgcagaatctgagagagttgtgcaggaggcgttggacaggattatggtgaatagg
acaaccatcattgtagcacatcgtctaagcacagtaagaaatgccgacatgattgcagtc
attcataggggaaagatggttgagaaaggatcacatttggagctagtcaaggatcctgaa
ggagcatacgctcaacttataaaactgcaagaagttagtagggactcaagaaagcagcag
ctggggtcagaggaccccccaaccccaagtagtgataataaaaggtacctgcggtcgata
agccgaggatcatcatctagcataggaaacagcagccggcactcgatttccaactctttt
ggcatgcctacacaactcgctgtggctgctgaatccatggatgttgaagctgcttcagac
gaagaaaaggcagcacccaaagtgccactccgacgacttgcctatctcaacaagccagag
ataccggtactcataatgggtaccatagctgctatcgtcaatggagcagtcctcccggtt
tttggcattctgatttccagcatgatcaagacattctatgagcccccacataaaatgaaa
aaggatgctcgattctgggctctaatgtatgtagtcctcggggtggtatcttttttagct
tatcctgggagatcatattttttctctattgctggttctaagctaataagaaggatcaga
tctctatgctttgagaaggtgatacggatggaagtgggttggtttgataagccagaaaac
tccagcggggcaatcggtgccaggctgtcggcagatgcagccagccttcgtggtttggtc
ggcgatgcacttgctcagcttgttcaggattcatcgtctgctgctgctggtttagccatt
gcatttgtagcatgctggcagttggctctcatcatgcttgctctcatccctctcatagga
ctcaatggatttgttcaggtgaaattcatgaaaggcttcagtgcggatgctaagatgatg
tatgaggaagcaagccaggtggcaaacgatgcggttgggagcataaggacggtcgcgtct
ttttgcgcagaagagaaagtaatgcaactttacagaaataaatgcgagggtcccaagaaa
gcggggatacagcaaggtttgatcagcgggattgggtttggagtgtcatttttcttgctt
ttctgtgtgtatgcagcaagcttttatgctggggctcggcttgttgaggctggaaagacc
accttctcagatgttttcagggtattctttgctctcacgatggcagccatagcagtgtcc
cagtcaagctcatttgccccagatacaagcaaagccaagacttctgctgtctctgtgttt
gccattctagaccgcaagtcagagatagacccaagtgatgaatccggaacgacattggat
aatgtcaagggggaaatcgagcttcgtcacatcagcttcaagtatcccaccagacctgat
gttcagatattccgtgatctatgcttaaccatccacagtggcaagacagtggcattggtt
ggagagagtggaagtgggaaatcaacagtgatctcgctgttgcaaagattttataatcca
gactctggcagtatcacgctggatgggatcgagatacaaaagtttcaactcaagtggctg
aggctgcagatgggtctggtgagccaagagccaatcttgttcaatgacaccatccgatcc
aacattgcttatggaaaagatggtgatgccacagagtctgaaataatagctgcttccgag
ttggcaaatgcccacaagttcatcagcagcttacaccagggctatgacacggtggtaggg
gaaagaggggtgcagatgtcgggtgggcagaagcagagagtggcgattgcaagggctatt
gtgaaaagtccaaagatactattgttggatgaggctacaagtgcactggatgcagagtca
gaaagggtggttcaagatgcgttggacagagtgatggtcaacaggaccacagttgtggtt
gctcataggttgtccaccatcaagggagctgatgtcattgcggtggtcaagaatggagtc
attgttgagaaagggaagcatgaaaaactaattaatatcaaggatggattctatgcatct
ttagttgctcttcacatgaccgcttccacttaa
DBGET
integrated database retrieval system
