Lactuca sativa (garden lettuce): 111908838
Help
Entry
111908838 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00500
Starch and sucrose metabolism
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
111908838
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
111908838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
WSD
Motif
Other DBs
NCBI-GeneID:
111908838
NCBI-ProteinID:
XP_023760406
LinkDB
All DBs
Position
6:complement(196578117..196585686)
Genome browser
AA seq
433 aa
AA seq
DB search
MSLVKVATFTQRLFLVTCFLAPSLAAAPTLLFQGFNWDSCNKDGGLYNSLLGSIDDLAAA
GITHVWLPPPSQSAAPQGYLPGRLYDLNASKYGNEEQLKSLIKALNNKGIKSVADIVINH
RTGEKQDGSGKYCIFEGGTPDERLDWGSSMICKDDDYCIGNGNLDTGGPFTGAPDIDHVN
PTVQKELSDWMNWLNTEIGFDGWRFDYVKGYSSSFTKIYMTNTSPDFAVGELWSSLAYGE
DGKPDYNHDNHRNELMKXVEEGGGGALTAFDFTTKGILQAAVQGELWRLIDPNGKPPGFI
GIMPANAVTFIDNHDTYSQNVWPFPSDKVMLGYTYILTHPGIPSIFYDHFFSWGLKEAII
NVSAIRERNGIGATSQVKILKYEADLYVAEIDEKIMVKIGSKDDLGNLIPENFEVATSGL
NYAVWEKNTIKFE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgttaaagtcgccactttcactcaacgtttgttcttagtcacatgctttctg
gcaccctcgcttgcagcagctcctactttgctgtttcaggggttcaattgggattcatgc
aacaaagatggtggattatacaattccctccttggctccattgatgacctcgccgctgct
ggaattacccatgtttggctcccacctccctcccaatccgctgcaccacaaggatatttg
ccaggacgtttatacgatctgaatgcatcaaaatacgggaatgaagaacaactgaaatct
ttgatcaaagctttaaacaacaagggaatcaaatccgttgcagacatagttataaatcac
agaacaggggagaagcaagatggaagcgggaaatactgtatcttcgagggtggaactcca
gatgaacgacttgattggggatcttccatgatttgcaaagacgacgactattgcattggc
aatggaaatctcgacaccggaggcccctttacaggtgccccagacatcgatcacgtaaac
cctacagtccaaaaggagttatctgattggatgaactggctcaacactgaaatagggttt
gatgggtggcgatttgattacgtaaaagggtattcctcgagtttcaccaagatctacatg
accaacacctctccagattttgcagttggagagctatggagctcgttagcttatggggaa
gatggaaaaccagattacaatcatgataaccatagaaatgaacttatgaagtaggtggaa
gaaggtggaggtggcgcgttaacagcttttgattttactacaaagggtatacttcaagca
gctgtgcaaggtgagttatggagattgatcgatccaaatggtaaacctcctgggttcatc
ggaattatgcctgcgaatgctgtgacattcatcgataaccatgatacatactcccaaaat
gtttggccatttccttctgataaagttatgttaggatacacctacattctcactcatcca
ggaatcccatcgattttctacgaccattttttcagttgggggttgaaggaagcgatcata
aatgtatcagcgattagggaaaggaacgggataggagcaacgagccaagtgaagatattg
aaatacgaagctgatttgtatgttgctgagattgatgaaaaaatcatggtgaaaatcgga
tcaaaagatgatcttggaaatctcattccagagaactttgaggttgctacttctgggttg
aactacgcagtatgggagaaaaacaccataaagtttgaatga
DBGET
integrated database retrieval system
