Lactuca sativa (garden lettuce): 111916364
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Entry
111916364 CDS
T05352
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111916364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111916364
04147 Exosome [BR:
lsv04147
]
111916364
04090 CD molecules [BR:
lsv04090
]
111916364
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111916364
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111916364
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111916364
CD molecules [BR:
lsv04090
]
Proteins
111916364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_5
AAA_21
AAA_15
AAA_30
nSTAND1
APS_kinase
AAA_25
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
111916364
NCBI-ProteinID:
XP_023767801
LinkDB
All DBs
Position
2:202712824..202719350
Genome browser
AA seq
1351 aa
AA seq
DB search
MPSQESQEEIKRDIEQWRWSEMQGLELVSENPPIPNPNPNLDPLSEEDKEAQNSLQRRRL
EMETEGQNSKNDGDKEKKKEKSVSDPTVGFGELFRFADGLDYVLMGIGTVGAFVHGCSLP
IFLRFFADLVNSFGSNANNIDKMSQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQS
TKMRIKYLEAALSQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSG
FVVGFTAVWQLALVTLAVVPLIAVIGGIHATTLAKLSSKSHEALSQAGNIAEQTIVQIRT
VLAYVGESRALQAYSAALKISQRLGYKSGFSKGFGLGATYFTVFCCYALLLWYGGYLVRH
HHTNGGLAIATMFSVMIGGLALGQSAPSMSAFAKARVAAAKIFRIIDHKPSVDRNSESGL
ELDSVSGLVELKNVDFSYPSRPDVKILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERF
YDPTSGQVLLDGHDIKGLKLKWLRQQIGLVSQEPALFATTIQENILLGRPDASMVEIEEA
ARVSNAHSFIIKLPDAYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDS
ESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVVVLQQGGVLEMGTHDELFAKGENGA
YAKLIKMQEIAHETAMNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSD
FSLSIEGGYPSYRHEKLPFKEQASSFWRLAKMNSPEWTYALIGSVGSVICGSLSAFFAYV
LSAVLSVYYNPDHEYMVKEIGKYCYLLIGVSSAALIFNTLQHFFWDVVGENLTKRVREKM
LAAVLKNEMAWFDQEENESSRIAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFV
LQWRLALVLVAVFPVVVAATVLQKMFMQGFSGDLEGAHAKATQLAGEAVANMRTVAAFNS
EAKIVNLFTISLQKPLHRCFWKGQIAGSGFGVAQFLLYASYAIGLWYASWLVKHGISDFS
KTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRKTEIEPDEIDSIPVPDRL
RGEVELKHVDFSYPSRPDIPVFRDICLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSS
GRVMIDGKDIRKYNLKSIRRHMAVVPQEPCLFATTIYENIAYGHESATESEIIEAATHAN
AHKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFLRKAEVMLLDEATSALDMESEKC
IQEALERICSGKTTIVVAHRLSTIRNAHVIAVIDDGKVGEQGSHSHLLKNYPDGCYAKMI
QLQRFSHGEVVDMVSVGSGSGSGSGSKRLEG
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacaagaatcccaagaggagataaagagagacatagagcagtggagatggtct
gaaatgcaaggtcttgaacttgtatctgaaaacccaccaatcccaaatccaaatcccaac
ttagacccactcagtgaagaagacaaagaagctcaaaatagcctacagagaagaagatta
gaaatggaaaccgaggggcaaaatagtaaaaatgatggagacaaagagaagaagaaggag
aaaagcgtcagtgatccaacagttgggttcggagagctgtttagatttgcagatggattg
gattatgtattgatgggtattggaacagttggtgctttcgttcatggctgttctttgcct
atttttctcagattctttgctgatcttgtcaattcatttgggtccaatgccaataacatc
gataaaatgtctcaagaagtcttaaagtacgcattctactttcttgtggttggagctgca
atttgggcatcttcatgggcagagatatcatgttggatgtggacaggagagcgacaatcg
acgaaaatgaggatcaaatacttagaagctgcacttagtcaagacatccagttcttcgac
acagaagtccgaacttcagatgttgtctttgctatcaacaccgatgctgttatggttcaa
gatgccattagtgagaagctggggaattttatacactatatggcgacatttgtgtctggt
tttgtggtgggattcacagcagtttggcaattggcgcttgtaacactagctgtagtgcct
cttattgcagtaatcggaggtattcacgccaccacattagctaaactctcttctaaaagc
catgaagctctttcacaagctggaaatattgctgaacagaccatcgtacaaattcggact
gttttggcatatgtgggtgaatcaagagcattacaagcctattcagcagcattaaaaatc
tcacaaagactcggatacaaaagtgggttttctaaaggattcggattaggtgcaacgtat
ttcactgtcttttgttgctacgcacttcttctatggtatggaggttatcttgttcgacac
catcacaccaatggaggtctcgccattgccaccatgttctccgtcatgattggtggactt
gctttaggccaatctgctccaagtatgtctgcatttgcaaaagcccgagtagctgcagca
aaaatctttcgaataattgaccacaaaccgagcgttgaccgaaattctgaatcgggtttg
gagttagactctgtttcagggcttgtggaacttaaaaatgtcgacttttcatacccttca
aggccagatgtaaaaattttaaataattttagtttaagtgttcctgctggtaaaactatt
gctttggtcggaagcagtggctctggaaaaagcacggtggtttccctcattgaaaggttt
tatgatcccacttcaggacaagtattgcttgatgggcatgacattaaaggacttaaattg
aaatggttaaggcaacaaattggattagttagtcaagaaccagcattatttgctacaacc
attcaagaaaacatacttttgggtcgacccgatgcatccatggttgagattgaggaagct
gcccgtgtttccaatgctcattctttcattatcaaattacccgatgcctatgatactcag
gttggggaaagaggtttacagttatccggtggacagaaacagagaatagcgatagcgagg
gcaatgttaaagaatccggcgatcctgcttttggatgaggcaacgagtgctttggattct
gaatcggaaaagttagttcaagaagctttggaccggtttatgatcggaaggacaactctg
gtaattgcccaccgtctctccaccatacgaaaggcggatgtggtggtggttttgcagcaa
ggtggtgttttggaaatgggaactcatgatgagctttttgcaaagggcgaaaatggtgca
tatgctaaacttattaagatgcaagaaatcgcccatgaaaccgccatgaataatgcaaga
aagagtagcgccaggccttcgagtgcaaggaactcagtgagttcaccaataatcacccgc
aactcatcatacgggcgatccccgtactcccggcggctgtcggatttctcaacctccgat
tttagtctatcaatcgaaggtggataccctagttatcgtcacgagaagcttccatttaag
gaacaagcaagttccttttggcggctagcgaaaatgaactcacccgaatggacatacgct
ttaatcgggtcggttgggtccgtgatctgtgggtccctcagtgccttttttgcttacgtt
ctaagtgcagtcctgagtgtatactacaatcccgatcatgaatatatggttaaagaaatc
gggaaatattgttatcttctaatcggggtgtcatcagctgcactcatcttcaacacttta
caacattttttctgggatgtggttggtgaaaatttgactaaacgagtcagagagaagatg
ctggctgcagttttgaagaatgaaatggcgtggtttgatcaagaggagaacgagagctca
agaatcgcggccaggttgtctctagatgctaataatgtccggtcagctattggtgaccgg
atttcagtcattatgcagaactccgccctcatgttggtggcctgcaccgctggttttgtt
ctccagtggcggctcgctcttgttcttgttgctgtttttcccgtggtggtggctgccacc
gttttgcagaaaatgttcatgcaaggattttccggcgacttagaaggtgcacacgcgaag
gcaacacagttagccggggaagcggtggctaacatgagaacagtggctgcgttcaactcc
gaggctaaaatcgtcaatctgtttacaataagtctccagaagccacttcatagatgcttc
tggaagggtcagatagccggcagtgggttcggggtggctcaatttttactctatgcttct
tacgcgatcggtctctggtacgcatcatggctcgtgaaacacgggatctctgatttctca
aaaacgatccgcgtgttcatggttctcatggtctcagccaacggtgccgccgaaacccta
accctagctcctgatttcatcaaaggtggtcgggccatgaagtcagttttcgatcttctg
gaccgaaaaacagagatcgagcccgatgagatagactcgatcccggtcccggatcgtctc
cggggagaagtcgaactcaaacatgtcgacttctcttacccgtctcgcccagatatcccg
gtattccgggatatctgtctccgagctcgggctggcaagactctggcactagtgggcccg
agtggttgtggaaagagctcggtaatttcactcatacaaagattctacgaaccgtcttcg
ggacgggttatgatagatggaaaagatataagaaaatataacttaaaatcaatacgacgc
cacatggccgtggtcccacaagaaccgtgtctattcgccaccacgatctatgaaaacatt
gcgtatgggcacgaatcagcaactgaatccgagattatcgaggctgccacccacgcgaat
gcccacaaattcatctcttctttacccgatggttacaaaacgtttgtgggggaaagaggg
gtgcagttatcgggagggcagaaacagagggttgcgattgctagggcgtttttgaggaaa
gcggaggtgatgttgctggatgaggccacgagtgcgcttgatatggagtctgagaagtgt
attcaagaggctcttgagcggatttgttcagggaagacaacgattgtggtggcacatcga
ttatcgactataagaaatgctcatgtgattgctgttattgatgatgggaaagtgggggaa
caagggtcgcattcgcatctgttgaagaattacccggatgggtgttacgctaaaatgata
cagttgcagagattctcacatggggaagtggtggatatggtttcagtggggtcagggtcg
gggtcgggatcgggttctaaacggctagaagggtag
DBGET
integrated database retrieval system
