Leptotrichia trevisanii: JMUB4039_0340
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Entry
JMUB4039_0340 CDS
T06733
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03410
Base excision repair
lte03430
Mismatch repair
lte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMUB4039_0340
03430 Mismatch repair
JMUB4039_0340
03440 Homologous recombination
JMUB4039_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_0340
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JMUB4039_0340
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JMUB4039_0340
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JMUB4039_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
BBM56373
UniProt:
A0A510L1N7
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All DBs
Position
376171..379161
Genome browser
AA seq
996 aa
AA seq
DB search
MRNTKWTAKTIPNPRQEREYIEKDNNQKSDEKTKKLKKTKTKKQNFENTNLSSVIDNDIL
KILYSRGITTEKEVREFLNPKLENIQNPYGLQDMEKTILEIEKAIKEQKNIWIYGDYDVD
GITSTSILYMALKELGAENVNYYIPIRDEGYGLNNAALKKIKESGADLVITVDCGITAFP
EVEFANSINLPIIITDHHNLHGDKVPDAITVVNPKRPENEFSFEFLAGVGTIFMVILCLY
ERIGKKAKTYKYLDLVAIGTVADIVPLVEENRILTKFGLEQLSRSKNKGLRFLLYKLFST
QNSDFNEKTEYNSYDVGFIIAPVFNAAGRLKDAKMVVKLLISDNDREIEIIVKELINKNF
ERKELQNEIVEKVEKHIEESDLKEDYVIVDYSPEYHHGVIGIAASKIVDKYYKPAIIIEV
KEDEGIAVGSCRSIGNFNILEALQSMPELFVKFGGHSGAAGFTIGIKNLELFKKKINKFA
KTKLREEDFVKIIEIDKQIPIQKVSYEFFQIIELLKPFGFGNPMPTFRTNNVLFENIKFI
GENKNHIMFDIKQKGFFNRNAVWFNSGEYFKELNENLFYDIVYKLKTEMFQDRYYTKVYV
EDVKVSQLKDDTLSYYHSLFNTSFPMKSVFYTNIELETEKKITMKMEFDQVSLFQGRKFI
GRLDYSISNLLILLSRYYNWNFSVKIEDVKQASNHNIVNILIKRDYNFKCYDHTQIGIFK
KIKEFLIGKMEYNSQTKELLAQFFKQNKNLIIKNIFDENEKYKYKMSNFENFLLTVGIYY
KKMTDKKSQIVINSEKKPTFNNFIKSYFDINEEYSENDYPFTLFYNYKDIEELKNIIKTD
FSMQNEINYEIEENSQNLEVNEEPKQLEYKKVEKIEFKNNENVENSENIVENQQEKLENS
SQIEKQEVEKRFCIIVNSDDFMIKTDNLDKNNIEEINSQIEVPQNITFLENSTKKERKNA
KNIFVGYLPIEEKIKLKKLLLNREKIYSDYSVNEIL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatactaaatggactgcaaaaactattcctaatccacgacaggagagggaatac
attgaaaaggacaacaatcaaaaaagtgatgaaaaaacaaaaaaattgaaaaaaactaag
actaaaaaacagaactttgaaaatacaaatttgagttcggtaattgataatgatattttg
aaaatactttattcaagggggataacgacagaaaaggaagtaagggagttcttaaatccg
aaacttgaaaatattcagaatccttatggattgcaggatatggaaaagacaattttggaa
attgaaaaggcaataaaggaacagaaaaatatttggatatacggggattatgatgtggat
gggattacttcgacatctattttgtatatggcgttaaaggagcttggggcggaaaatgtg
aattattatattccgattcgggatgaagggtatgggctgaataatgctgcattgaagaaa
ataaaggaatctggggcggacttggtaattactgtggattgtggaatcacggcatttcct
gaagtggagtttgcaaattctataaacttgccgataattattacggatcatcacaatttg
catggggataaagttccagacgctatcacagttgtgaatcccaaacgtcctgaaaatgaa
ttttcctttgagtttctagctggagttggaactatttttatggtaattctttgtctttat
gaaagaattgggaaaaaagcaaaaacatataaatatcttgatttggtggcaattggtaca
gttgcggatattgtgccactggtggaagaaaacaggattttgactaagtttgggctggag
cagcttagccgttctaaaaataaggggcttagatttttgctgtataaattatttagtacg
caaaattcggattttaatgagaaaactgaatataattcgtatgatgtgggctttatcata
gcacctgtctttaatgcggctggaaggcttaaagatgcaaaaatggtggtaaaattacta
atttcggataatgacagggaaattgagataatcgtaaaggaattgattaataaaaatttt
gagcggaaagaattgcagaatgaaatcgtggaaaaagtagaaaaacatattgaagaaagc
gatttgaaggaagattatgtgattgtggactattcgcctgaatatcatcacggtgtaatt
ggtatagcggcttccaaaattgtggataaatattacaagcctgcgattatcattgaagtg
aaggaagatgaaggaatagcagttggatcgtgccgaagtattgggaattttaatatttta
gaggcgttgcagtcgatgcctgagctttttgtgaagtttgggggacattctggagcggct
ggatttacgattggaataaaaaatttggaattatttaagaaaaaaataaataaatttgca
aaaacaaaattaagggaagaggattttgtaaaaataatagaaattgacaagcaaatccca
attcaaaaggtttcgtatgaatttttccaaataatagaacttttgaagccatttggattt
ggaaatccaatgccgactttcaggacaaataacgtactttttgaaaatataaagttcatt
ggagaaaataaaaatcatataatgtttgacataaagcaaaagggattttttaatagaaat
gctgtctggtttaattctggcgagtattttaaagaactgaacgaaaacttgttttacgat
attgtttacaaattgaagacggaaatgtttcaagacagatattacacaaaagtgtatgtt
gaggatgtgaaagtatcgcagttgaaggatgacactttgtcttattatcattcgcttttt
aacacatcttttccgatgaagtcagtattttacacaaatattgagctggaaacggaaaag
aaaattacaatgaaaatggaatttgatcaggtttcactttttcaagggagaaagttcatt
ggacggcttgattacagcatttccaacttgttaattctgttaagtcgttattataactgg
aattttagtgtaaaaattgaggatgtaaagcaggcttcaaaccataatatcgtaaatata
ctgataaaaagagattataattttaaatgttatgatcacacacaaattggaatttttaag
aaaataaaagaatttttgattgggaaaatggagtataattcacaaaccaaggaattactg
gcacagttttttaaacaaaataaaaacttgattataaaaaatatttttgatgaaaatgaa
aaatataaatacaaaatgtcaaattttgaaaactttttactaacagttggaatttattat
aaaaaaatgactgataaaaaaagccagattgtcataaattcagagaaaaagccaactttt
aacaattttataaaatcatattttgatataaatgaagaatattctgaaaatgactatccg
tttacattgttttataattacaaagatatagaagagctgaaaaatattataaaaactgat
ttttcaatgcaaaatgaaatcaattatgaaattgaggaaaatagccaaaatcttgaagtt
aatgaagagccaaaacagctggaatacaagaaagttgaaaaaatagagtttaaaaataat
gagaatgtggaaaactcagaaaatattgtggaaaatcagcaggaaaaacttgaaaattca
agtcaaattgaaaagcaggaagtagaaaaaagattttgcataattgtaaattctgatgat
tttatgataaaaacggataatttagacaaaaataatattgaggaaataaattctcaaatt
gaagtaccgcaaaatataacatttttggaaaattctacgaaaaaggaaagaaaaaatgca
aaaaatatttttgtgggatatttgccaattgaggaaaaaattaagttgaaaaagttgctt
ttgaatagggaaaagatttactctgattattcggttaatgagattttataa
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