KEGG   Lachancea thermotolerans: KLTH0H01408g
Entry
KLTH0H01408g      CDS       T01117                                 
Name
(RefSeq) KLTH0H01408p
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lth  Lachancea thermotolerans
Pathway
lth03030  DNA replication
lth03410  Base excision repair
lth03420  Nucleotide excision repair
lth03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KLTH0H01408g
   03410 Base excision repair
    KLTH0H01408g
   03420 Nucleotide excision repair
    KLTH0H01408g
   03430 Mismatch repair
    KLTH0H01408g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lth03032]
    KLTH0H01408g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0H01408g
Enzymes [BR:lth01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     KLTH0H01408g
    6.5.1.6  DNA ligase (ATP or NAD+)
     KLTH0H01408g
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     KLTH0H01408g
DNA replication proteins [BR:lth03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    KLTH0H01408g
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     KLTH0H01408g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     KLTH0H01408g
   NER (nucleotide excision repair)
    Other NER factors
     KLTH0H01408g
   MMR (mismatch excision repair)
    Other MMR factors
     KLTH0H01408g
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 8294252
NCBI-ProteinID: XP_002555939
UniProt: C5E216
LinkDB
Position
H:complement(129752..131923)
AA seq 723 aa
MLRLVRAEMSSIKKQATLAKFFSSKKRSVEEEKSHEPAKKLHSDPIGAGSGSPSSSPPLA
TGSSDAGSVKVETSATSTGENTKAGTPTLPDSDEPAKRAVAATKGDPAKLGASAPKDSKI
LYAEMCNVFNEIEGTSSRLQIVKLCGDFLYSVLLKARKDIVPITYLLINKLGPDYQPGLE
LGLGEGLLMKTISESCGKSLQQIKARYRELGDLGRIAQEARAVQPTMFKPKPLTTGEVFS
NLQAIARSQGKDSQLRKVQLIKRMLTACQGLEAKFLIRSLESKLRIGLAEKSVLVALSKA
LLTYEHNGKEPSSELVDTAEQKIRDAFCQVPNYQIVIETALEHGIMELDKHCVLTPGIPL
KPMLAKPSKSISEVLDRFQGQRFTCEYKYDGERAQVHLLPDGSMRIYSRNGENMTERYPE
IRISDFIADPARTHTLILDCEAVAWDKEKNTILPFQVLSTRKRKGVAVEDVKVRVCLFAF
DILCYNDEPLITRPLAERRACLERALVPVPGELQLASEVTTMSLDELQHYLDQAVRDCCE
GLMVKILEGEESHYEPSKRSRNWLKLKKDYLQGVGDSLDLCVLGAYYGRGKRTGTYGGFL
LGCYNQDSGEYETCCKIGTGFSEEMLQTLFDRLSPTAIPTPKAFYVHSESAPPDVWFEPT
LLFEVLTADLSLSPVYKAGTSSYGKGISLRFPRFIRLRDDKTPEEATSSEQVVEFYESQS
HVS
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgctaaggttggtacgcgcggaaatgtcgtctatcaaaaaacaagccactttggccaaa
ttctttagttccaagaagaggagtgttgaagaagaaaagtcgcatgaacctgccaaaaag
ctccattcagaccccattggggcaggttctggaagcccgagttcctccccacctcttgcg
acaggctccagtgatgctggctctgtgaaggttgagacatctgccaccagcacaggagaa
aacactaaggcaggaacaccaacgctcccagactcagatgagcctgccaagcgggccgtg
gccgccacaaaaggggaccccgcgaagcttggagcttcagctcctaaggacagcaagatt
ttgtacgctgagatgtgcaacgtgttcaacgagatagagggcacgtcgtcgagacttcaa
attgtaaagctttgtggtgacttcctgtactcggtgctgctcaaagcgcgtaaagacata
gttcccatcacttacctacttatcaacaagttaggtcccgactatcagccgggcctagag
ctggggctcggtgaaggcctgctcatgaagacaatcagtgagagttgcggcaagtcgctg
caacagattaaggcacgctatcgcgaacttggcgatctcggtcgcatagcgcaggaagct
cgggctgtacaacctacgatgttcaagcctaaaccactcactacaggagaggttttctca
aacttgcaggccattgcgcggtcgcaaggaaaagactcacaactgcggaaggttcagctt
atcaagagaatgctcactgcatgccaaggattagaggcaaaatttctcattagatcgctt
gaatcgaagctccgtattggccttgccgaaaaatctgtgctcgtggcgctttcgaaggcg
ctacttacgtatgaacacaacggcaaagaaccctcaagcgaacttgtggacactgcagaa
cagaagatccgcgatgcattctgccaagtgcccaactatcagatcgtgattgagacggct
ctagagcatggcattatggagctcgacaaacactgcgtactgacgccaggcatacctcta
aagccgatgcttgcaaagccgtcgaagtcgatttcagaggtcctggaccggttccagggc
cagcgcttcacctgcgagtacaagtatgatggcgagcgtgcgcaagtgcatctgctgcca
gacggcagtatgcggatctattcaagaaatggtgagaacatgacggagcggtaccccgaa
atccggatctctgactttattgcggatcccgcgcgcactcacacgctaatccttgattgc
gaggcagtcgcctgggacaaagagaagaacaccattctgccctttcaagtgctcagcacg
cggaagcgcaaaggcgtggcagtcgaagatgttaaggtgcgcgtgtgcctgttcgcattt
gacattctgtgctacaacgatgagcctcttatcacacgcccactagccgagcgccgcgcc
tgcctggagcgcgcgcttgtcccggtcccgggcgagcttcagctggctagcgaggtcacc
accatgagtctcgatgaacttcagcattatctcgaccaagccgtgcgcgactgttgcgaa
ggcctcatggtcaagatcctcgagggcgaagagtcccactacgagcccagcaagcgttcg
cgcaactggctgaaactcaagaaggactatttacagggcgtgggtgactctcttgacttg
tgcgttctgggcgcgtactacggccgtggcaagcgcacgggtacctacggtgggtttttg
cttggttgctacaaccaagattccggtgagtatgagacctgctgcaagattggcaccggt
ttttccgaggagatgctccagaccctgttcgaccgcctcagccctaccgcaattcctaca
cccaaggccttctacgtccacagcgagagcgctccacccgatgtttggtttgaacccacc
ctccttttcgaggtgctgaccgcagatctctcgctctcgcctgtttacaaggccgggacc
agctcgtacgggaaaggcatctctctccgcttccctcgtttcatccgcctcagagacgat
aagacacctgaagaagctacgtcttcagagcaggttgtggagttttacgaatcccagtcg
cacgtaagctga

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