Leucobacter tenebrionis: KVY00_14655
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Entry
KVY00_14655 CDS
T09454
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ltn
Leucobacter tenebrionis
Pathway
ltn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ltn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KVY00_14655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ltn03400
]
KVY00_14655
Enzymes [BR:
ltn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KVY00_14655
DNA repair and recombination proteins [BR:
ltn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KVY00_14655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QZY51776
LinkDB
All DBs
Position
complement(3200950..3203496)
Genome browser
AA seq
848 aa
AA seq
DB search
MARTAHRDRKQQTVEVGGHRIRVSNLDKVLYPSTGTTKGDVIGYYGAIAPTMLPHCRDRP
ATRKRWPDGVGDDGRGEVFFQKDIGDSAPDWVRTGRIQHKDHVNHYPLVNDEATLVWLAQ
LAALEIHVPQWRFDAEGEARNPDRLVFDLDPGDGVTLRECARVAFLVRDILRGMGLPSIP
VTSGSKGIHLYAALDGTQTSDQASAVARELARSLEADHPDDITSSMKRALRPGRVFIDWS
QNNAAKTTVTPYSLRGRIAPTVAAPRTWRELASPHLRQLEFHEVLERVARRGDPLAELAE
LSDAHAVSDRLAVYRAKRDAARTPEPVPAASGAKGSKGSGGAKVSKDSKGSTGRADTDDP
DSEGSRRAEPVFVIQRHEARRLHFDFRLEHDGVLVSWALPKGVPTDPKVNHLAVPTEDHP
MSYRHFEGVIPKGEYGAGNVEIWDSGTYELEKWRDDEVIVRLTGRPGGGLGGPRRYALFR
AGEAGGKPRWMIHLMSDEPAAQGRGKKRNPDPAPDPDPPSAIPPRAPAMRPMLSERGAPA
EFDRLDEREWAFEMKWDGIRALAFVDGERCTLRSRSDGDLTASYPEFAELPAVVNGEEAV
LDGEIIALGPDGAPSFGRLQRRFGLTNRADVARARREAPASYLVFDVLSINGRDCRALPY
RQRRELIEALVEEDADVPVALPDVFAGEARDAAETSRGLHLEGVMAKRWTSPYRSGVRSG
DWLKFPLINTEEAVVIGWRESTADARGLASLLLADWRDGAWRYAGRVGTGFSARDRRAIR
DRLAPLECDEPAAEVPREVRRDAHWVRPELVAEVESKARTATGSFRQAVWRGWRPDKRPE
DLAAGSGE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacagcacacagggatcgcaagcagcagacggtcgaggtgggcggtcaccgg
atccgcgtctcgaacctcgacaaggtgctctacccctctaccggaaccaccaagggagac
gtgatcggctactacggcgcgatcgcgccgacgatgctgccgcactgccgcgaccggccg
gcgacgcgcaagcgctggcccgacggcgtgggcgacgacggtcgcggcgaggtgttcttc
cagaaggacatcggcgattccgcccccgattgggtgcgcacgggccgcatccagcacaag
gatcacgtcaatcactacccgctcgtgaacgacgaggcgacgctcgtctggctcgcgcag
ctcgccgcgctcgagatccatgtgccgcagtggcgcttcgatgcggagggcgaggcccgg
aatccggatcgcctcgtgttcgacctcgacccgggtgacggtgtgacgctgcgcgagtgc
gcgcgggtcgcgttcctggtgcgcgacatcctgcgcggcatgggcctcccctcgatcccg
gtgacgagcggcagcaagggcatccacctctacgccgcgctcgacggcacccagacctcc
gaccaggcgtcggccgtggcgcgcgaactggcccgctcgctcgaggccgaccaccccgac
gacatcacgagctcgatgaagcgagcgctgcgcccgggccgcgtgttcatcgactggagc
cagaacaatgcggcgaagaccaccgtcacaccgtactcgctgaggggcaggatcgcgccc
accgtcgccgccccgcgcacctggcgggagctcgcgtcgccccacctgcggcagctcgag
ttccacgaggtgctcgaacgggtcgcgaggcggggcgatccgcttgcggagctggcggag
ttatcggacgcgcacgcggtgtcggatcgcctggccgtgtaccgggcgaagcgcgacgcg
gcgcgcaccccggaaccagtgcccgcggcgagcggcgcgaagggctcgaagggctcgggc
ggcgcgaaagtctcgaaggactcgaagggttcgaccggcagggccgacaccgacgatccc
gattcggagggctcccgacgggccgagcccgtcttcgtgatccagcgccacgaggcgcgc
cggctgcacttcgacttccgcctcgagcacgacggtgtgctcgtcagttgggcgctgccg
aagggtgtgccgaccgacccgaaggtgaaccacctcgcggtgcccacggaggaccacccg
atgtcgtaccggcacttcgagggggtcatcccgaagggcgagtacggggcaggcaacgtc
gagatctgggactccggcacctacgagctcgagaagtggcgtgacgacgaggtgatcgtg
cggctcaccggtcgtccgggcggcggcctcggcgggccgcggcgctacgcgctgttccgc
gcgggcgaggccggcgggaagccgcggtggatgatccacctcatgagcgacgagcccgcg
gcacagggccggggcaagaagcggaatccggatcccgcaccggaccccgatcccccgtcc
gcgatcccgccccgggcccccgccatgcgtcccatgctttccgagcgcggcgcccccgcc
gagttcgaccgcctcgacgagcgcgagtgggcgttcgagatgaagtgggacggcatccgc
gcgctcgccttcgtcgacggcgagcgctgcacactgcgcagccgctccgacggagacctc
accgcgtcgtaccccgagttcgcggagctgcccgcggtggtgaacggtgaggaggcggtg
ctcgacggcgagatcatcgcgctcggacccgacggcgcgccgagcttcggccggctgcag
cgccgcttcgggctgacgaatcgcgccgacgtggcgcgggcgcgccgggaagccccggcc
tcctacctcgtgttcgacgtgctgagcatcaatggccgggactgccgcgcgctcccctac
cggcagcgccgcgagctgatcgaggcgctcgtcgaggaggacgccgacgtgccggtcgcc
ctgcccgacgtcttcgccggggaggcgcgcgatgcggcggagacgagccgtggcctgcac
ctcgagggtgtcatggcgaagcgctggacgagcccctaccgctcgggggtgcgctcaggg
gactggctcaagttcccgctcatcaacaccgaggaggccgtggtgatcggctggcgcgag
agcaccgccgacgcccgcggtctcgcgtcgctgctgctcgcggactggcgggacggcgcc
tggcgatacgcgggccgggtgggcaccgggttctcggcgagggatcggcgcgcgatccgc
gaccgcctcgcgccgctcgagtgcgacgaacccgcagccgaggtgccccgcgaggtgcga
cgcgacgctcactgggtgcggccggagctcgtggccgaggtcgagtcgaaggcgcgcacc
gcgaccggcagcttccgtcaggccgtgtggcggggatggcggcccgacaagcgccccgag
gatctcgccgcgggctccggcgaatga
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