Limnobacter thiooxidans: RGQ30_19820
Help
Entry
RGQ30_19820 CDS
T09704
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lto03009
]
RGQ30_19820
Enzymes [BR:
lto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RGQ30_19820
Ribosome biogenesis [BR:
lto03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RGQ30_19820
BRITE hierarchy
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BET26481
UniProt:
A0AA86JG80
LinkDB
All DBs
Position
complement(2195779..2197143)
Genome browser
AA seq
454 aa
AA seq
DB search
MRTNKRKTTENLETGNAIEVVAVSMDSESQDMEWGDVLNQVEGLKSEDAGSAGKNRSKLN
VRLDPELAPKLHKVLADSGMGSRREMEELIVAGRVSVNAEPAHLGQRVLPTDQVRVNGKL
IQRKNKSKPPRVLIYHKPAGEIVSMDDPQGRTTVFQKLPKISNGKWIAVGRLDYNTEGLL
LFTSSGDLANRLMHPRYEVQREYAVRILGELTEEQRQQLLTGIQLDDGPAKFLYVDVAGG
EGANRWYKVGLKEGRNREVRRMFEACNLTVSRLIRTRFGDIMMPSTLKRGRHMEMEALEA
MSYMQSLGLKVDESAQEGAIRRDQKNLGSKYSKRRSGQPLIDPGLAFTTPTQTYLTVSGA
TAAAALSNQNNLSSAGGLSRNGGNGRTGERNGNRTGGNGGAGNGAAPGKFGGAGKRTGTG
RPGGPSAGRGPARSTGPVSEQKPQQRRRRKAPAA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaagcgcaaaacaactgaaaaccttgaaaccggcaatgccattgaagtg
gtcgccgtcagcatggactccgaaagccaggacatggaatggggcgatgtgctgaatcag
gtagaaggcctgaagtcggaagacgcaggtagcgcaggcaagaatcgcagcaaactcaac
gtccgcctggaccctgaattggcccccaagttacacaaggtgctggctgattccggaatg
ggttcccgtcgggaaatggaagagctgattgtcgctggcagggtttccgtgaatgccgaa
cctgcccacttggggcagcgtgtgctgccaaccgaccaggtgcgtgtcaacggcaaattg
attcaacgcaaaaacaaatccaagccgccgcgtgtcttgatttaccacaagcccgctggt
gaaattgtgtcgatggacgaccctcaagggcgtaccaccgtgtttcaaaagcttcccaaa
atttccaacggcaagtggatcgctgtcgggcgactcgactacaacaccgaaggcctgttg
cttttcacctcatccggtgacctcgcaaaccgcctcatgcacccccgttatgaagtgcaa
cgcgaatacgctgtgcgcatccttggtgaactcaccgaagagcagcgccagcaattgctc
accggtattcagcttgacgacggtccagccaaattcctgtacgtggatgtggctggtggt
gaaggcgccaatcgttggtacaaagtgggcttgaaagaagggcgcaaccgcgaagttcgt
cgcatgttcgaagcctgcaacctgactgttagccgcctgatccggacccgtttcggcgac
atcatgatgccgtccacgttaaagcgcggccgccacatggaaatggaagcgcttgaagcc
atgtcttacatgcaatcgcttggcttgaaagtggatgaatctgcgcaggaaggcgccata
cgccgcgaccagaaaaacctgggttccaagtacagcaaacgtagaagcgggcagccattg
atcgatccaggtctggcctttaccacgcccacacagacttacctcaccgtttcgggtgcc
actgcggcggcggctttgagcaaccagaacaacctgtcttcagccggtggcctgtcacgc
aatggcggtaatggccgcacgggcgagcgcaacggcaaccgcactggtggcaatggtggc
gcgggcaatggtgcggccccgggcaaatttggtggtgccggtaaacgcactggtacaggt
cgtcccggtggtccgtcagctggacgtggcccggcgcgaagtactggccctgtttccgag
cagaagccccagcaaagacgtcgcagaaaggcgcctgctgcatag
DBGET
integrated database retrieval system
