Limnobacter thiooxidans: RGQ30_30300
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Entry
RGQ30_30300 CDS
T09704
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00907
Pinene, camphor and geraniol degradation
lto01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RGQ30_30300
Enzymes [BR:
lto01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
RGQ30_30300
BRITE hierarchy
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATPgrasp_ST
ATP-grasp_3
HlyD_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BET27529
UniProt:
A0AA86J0W4
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Position
3351217..3353211
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AA seq
664 aa
AA seq
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MPRIKKLLIANRNEIARRILRAAKPLGIATVAVYSEADEKALHVQEADESYCIGPAPSLD
SYLRIDRLIETALKCGADAIHPGYGFVSESPAFAQACVEAGITLVGPTPQAIADMADKAR
AKEIAQQAGLPCIPGFSEAGAGVSELMAAAQQIGYPVMIKALAGGGGRGMRLVMNEQEFA
SQLHSAQLEAKNAFNDDRVMLEKAIINPRHIEIQVLADTHGHAVHLGERDCSVQRRHQKI
VEEAPSPAVNAELRARMGEAALKLVHATNYVGAGTVEFLLDTTGNFYFIEMNTRLQVEHG
VTEAITGLDLVQWQLRIAAGEHLILQQNDITFTGHAIQGRLCAEDPARDFMPQTGPVLAW
HADPNSRCDHALQTGGEVSPWYDSLLAKVIVHADNRLAACEKLADSLNRTVLMGFEHNAL
YLQRIASHPVFQAGDFGTGFLAEHADKLLQAQSFESEYAIAAIFLALEEHSTPAWPKALS
GFSSTRALPRPLKLKAAGQSLALKVTQLDHQTIHTCQVDGLGSQPVTVQNWTSVKSGETF
QIKATVNGHFGRYSLAINGNSIWVQSWLNPQAALIENETLQSSAAAAEGVFQPLIKSPMN
GKITQVLVEPGQQVEAGTVLVCLEAMKMEHRITAKTAAIVDQVHVQVGEQMKLKQTMIQL
KEAG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaatcaagaaacttctgattgccaaccgcaatgagattgcgcgcagaatattg
cgcgcagccaaacccttgggcattgccaccgtggccgtgtactcggaagcagatgaaaaa
gccctgcatgtgcaagaggccgatgagtcttactgcatcggccctgcgccttctcttgat
tcgtatttgcgaatcgacaggctgattgaaacggcattgaaatgcggtgccgatgccatt
caccccggctatggttttgtgtcagaaagccccgctttcgcccaggcctgcgtcgaggcc
ggcatcaccctggttggccctacaccgcaagccattgcagacatggccgacaaggcacgg
gccaaggaaattgcacagcaagctggcttgccctgcattccgggtttcagtgaagcaggt
gcaggtgtcagcgagctgatggccgcggctcagcagatcggctacccagtcatgatcaag
gcgctggccggtggtggcgggcgcggcatgcgcctggtcatgaacgaacaggaatttgcc
tcgcaactgcattcggcccagcttgaagcgaaaaacgccttcaacgacgaccgggtcatg
cttgaaaaagccatcatcaacccgcgccacattgaaatccaagtgctggccgacacgcac
ggccatgccgtgcatttgggcgaacgcgattgctccgtgcagcgccgtcaccagaaaatt
gttgaagaagccccaagccccgccgtgaatgccgaacttcgcgcacgtatgggcgaagcc
gccttgaaactagtgcacgccaccaactatgtgggggccggcaccgtagaatttttgctc
gacaccacgggtaacttctacttcattgaaatgaacacccgcctgcaagtcgagcacggc
gtcaccgaagccatcaccggccttgacctggtgcagtggcaactgcgcattgcagccggt
gaacacctgatcttgcagcaaaacgacatcaccttcactggccacgctattcaaggtcgt
ctgtgtgccgaagatccggcccgcgacttcatgccacaaaccgggccagtactggcttgg
catgccgaccccaacagccggtgcgaccacgccttgcaaaccggcggcgaagtcagcccc
tggtacgacagcctgctggccaaagtcattgtgcacgctgacaaccggcttgctgcctgc
gaaaaactggctgattcactgaaccgcactgtgctcatgggttttgagcacaacgccctg
taccttcagcgcattgccagccacccggtatttcaggccggtgattttggtactggcttt
ctagctgaacacgccgacaaactgctgcaagcgcaaagttttgaaagtgaatacgccatt
gccgcaattttcctggccttggaagaacacagcacaccagcctggccaaaggccctaagt
ggcttttccagcacccgtgccctgccccgcccattgaagttgaaagctgccggccaatcg
cttgctctcaaagtgacacaactggatcatcaaacaatccacacctgtcaggttgacgga
ctgggcagccaaccggttacagtccaaaactggacatccgtaaaaagcggtgaaacattt
caaatcaaggctacggtcaacggtcatttcggccgctacagcctggccatcaacggcaac
agcatctgggttcaatcctggctcaacccgcaagccgcactcattgagaatgaaaccctg
caaagcagtgccgctgccgccgaaggtgtatttcagcccctcatcaaaagcccgatgaac
ggcaaaatcacccaagtactggtagaacccggacaacaggtggaagccggcactgtgctg
gtctgcttggaagccatgaaaatggaacaccgcattactgcaaaaaccgcagccattgtg
gaccaggttcatgtgcaggtgggcgaacagatgaagctcaaacagacaatgattcagctc
aaagaagctggctga
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