Leucobacter triazinivorans: EVS81_03365
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Entry
EVS81_03365 CDS
T05843
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ltr
Leucobacter triazinivorans
Pathway
ltr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ltr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EVS81_03365 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ltr03400
]
EVS81_03365 (mfd)
Enzymes [BR:
ltr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EVS81_03365 (mfd)
DNA repair and recombination proteins [BR:
ltr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EVS81_03365 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
RecG_dom3_C
AAA_22
UB2H
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QBE47983
UniProt:
A0A4P6KCW1
LinkDB
All DBs
Position
complement(735099..738959)
Genome browser
AA seq
1286 aa
AA seq
DB search
MTLSGIERLLEASPSFARALDASGSDAEFSVAEGLRAPLIAGLVRRRREAGDRGALLVIA
ATSREADALRSALGSLLPEAQTAEFPAWETLPHERLSPSAETVGRRAAALRVLREHDGSR
PMILVASVRAALQPVSPHAAQAEPLVLRAGETPAVVLRPRSGSQDLTDSNVDPAHCDSLR
SRSMTGFAARRMTTIGLDAVARELVLRAYTRVDMVTRRGEFAVRGGILDVFPPEASQAVR
VDFFGDEVDQIRRFAVSDQRSAGDPIDALELWPARELLLTDEVRERAAELLPRYPALSSL
LEKMSQGIPVEGMESLLPQLVPGLRPLTALLPDGGAVLVASPERVAGRAVSLAETNREFL
EAAWSAATAGADAPVPTDDSGMLSVSELRVASHGRPWWTVSTFVSGADDAASPVEQSAAE
ATPESTDGLDSLRPLNQRDGAMDPATARRMTDAGDPLAVEVAGGHFPRPASGADATQSAI
RLFSERLREGWHAIVSAQGVGLVERARDVLAEAGAAARMVEQLPERLEDGVVYLVAGTAW
SGFESTEAKLLLATEAEFFGRSAGSQAASGQKLAKRRGKNVVDPLKLVAGDYVVHETHGI
GQFVELTQRMVPTGIGRDATKALREYLVLEYASTKRGMPKDKLYVPTDQLDQLSRYVGGE
APALSKMGGSDWANAKKKARKAVRDIAVELVKLYSARVASKGHPFSPDTPWQHELEEAFP
YAETLDQLTTIDEVKRDMERAIPMDRLIAGDVGFGKTEVAVRAAFKAVQDGKQVAMLVPT
TLLVNQHLETFQDRFAGFPVRLRALSRFQSDKEANDTIEGLAAGTVDVVIGTHRLLSDSI
IYKDLGLLIIDEEQRFGVEHKDSLKKLKTNVDILAMSATPIPRTLEMAVTGIREMSTLAT
PPEDRHPILTFVGPRSDKQITAAIRREMLREGQVFFVHNRVQSIGRVAAHIAELVPEARV
AVAHGRLSEHQLEQVVQDFWERKFDVLVSTTIVETGLDIANANTIIIDGADKYGLSQLHQ
LRGRVGRSRERAYAYFLYDPEKPLTEHAHERLETLAANNELGSGMQVALKDLELRGAGNL
LGGEQSGHIAGVGFDLYLRMIGEAVNTFKGEESTGPVELVLELPVDAHIPEEYVESERLR
LEAYQKFSAASHPHAPDDHVSLVLEELADRYGEPPAEVQRLAAVSALRRRAAKLGLSKVV
AAGPALRIEPVKMLDSRRMRMNRMYPGARYTEATGALQIPLPGGTASSRSPLAGVGQKRV
GDESDIVAWTGRVLATLLEEDAGTGS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgagcgggatcgaacgcctgctcgaggcgtctccgtcgttcgcccgggcgctc
gacgcgagcggctccgacgccgagttctcggtcgccgagggcctgcgggctccgctcatc
gcgggactggtgcgtcggcgccgtgaggcgggggatcgcggcgcgctgctggtgatcgcc
gccacgagccgggaggccgatgcgctgcgctcggcgctcggctcgctcctgccagaggcg
cagaccgccgagttccccgcctgggagacgctgccgcacgagcgcctgagcccgagcgcc
gagaccgtcgggcgccgggcggcggctctgcgcgtgctgcgcgagcacgacggatcccgc
ccgatgattctcgtggcctcggtgcgggcagccctgcagccggtgtcaccgcacgcggcg
caggcggagccgctcgtgctgcgcgccggtgagacccccgccgtcgtcctgcggccgcgc
agcggatcgcaggatctcaccgactccaacgtggatcctgcgcactgcgactcgcttcgc
tcgcgcagcatgaccggcttcgccgcgcgcaggatgacgaccatcggcctcgacgcagtc
gcgcgcgaactggtgctgcgcgcctatacccgagtggacatggtgacgcgccgcggcgag
ttcgcggtgcgcggcggcatcctcgacgtcttcccgcccgaggcgtcccaggccgtccgc
gtggacttcttcggcgatgaggtcgaccagatccggcgctttgcggtctcggatcagcgc
agcgccggggatcccatcgacgcgctcgagttgtggcccgcgcgcgagctgctgctcacc
gacgaggtgcgcgagcgcgcggcggagctgttgccgcgctacccggcgctgtcctcgttg
ctcgagaagatgagccaggggattcccgtcgagggcatggagagtctgctgccccaactc
gtgccgggacttcgtccgctcaccgcgctgctgcccgacgggggagcggtgctcgtggcg
tcgcccgagcgcgtggccgggcgcgccgtgagcctggccgagacgaaccgggagttcctc
gaggccgcctggagcgcggcgacggccggcgcggatgcgcccgtgccgaccgacgacagc
ggaatgctctcggtctcggaactgcgggtcgcgtcgcacgggcggccctggtggacggtc
tccaccttcgtcagcggcgccgatgacgccgcttcgccggttgagcagagcgcagcggag
gcgacacccgagtccacggatggtctcgactcgctgcgcccgctcaaccagcgggacgga
gccatggatcctgcgactgcgcgcaggatgacggacgcaggtgaccccctcgccgtcgag
gtggcaggcgggcacttcccgcgcccggcgagtggtgcggatgccacgcagtcggcgatc
cgcctcttctcggagcgcctgcgcgagggatggcacgcgatcgtcagcgcccagggcgtc
ggcctggtggagcgcgcccgcgacgtgctcgcggaagcgggcgccgcggcgcgcatggtg
gagcaactccccgaacggctcgaggacggcgtcgtctacctcgtggcgggcaccgcgtgg
tcgggattcgagagcaccgaggcgaagctgctgctcgccacggaggccgagttcttcggc
cgctcggcgggatcgcaggcggcgagcggccagaagctcgcgaagcggcgcggcaagaac
gtggtggatcccctgaagctcgtcgcgggagactatgtggtgcacgagacgcacggcatc
ggtcagttcgtcgagctgacgcagcgcatggtgccgaccggtatcggcagggacgcgacg
aaggcgctgcgcgagtacctggtgctcgagtacgcgtcgaccaagcgcggcatgcccaag
gacaagctgtacgtgccgaccgaccagctggaccagctgtcgcgctacgtcggcggcgag
gcgcccgccctctccaagatgggcggcagcgactgggccaatgccaagaagaaggcgcgc
aaggcggtgcgagacatcgccgttgagctggtgaagctctattcggcgcgtgtcgcctcg
aaggggcaccccttctcgccggacaccccctggcagcacgaactggaggaggcgttcccc
tacgccgagacgctcgaccagctcaccacgatcgacgaggtgaagcgcgacatggagcgg
gcgattcccatggaccggctcatcgccggcgacgtgggcttcggcaagaccgaggtggcc
gtgcgggcggcgttcaaggcggtgcaggacggcaagcaggtcgcgatgctggtgcccacc
acactgctcgtgaatcagcacctcgagaccttccaggatcgcttcgccgggtttcccgtg
cgcctgcgcgcgctcagccgcttccagagcgacaaggaggcgaatgacacgatcgagggg
ctcgccgccggcacggtcgacgtcgtcatcggtacgcatcggctgctctcggacagcatc
atctacaaggatctcgggctgctcatcatcgatgaggagcagcgcttcggcgtggagcac
aaggactcgctgaagaagctcaagaccaacgtcgacatcctcgcgatgagcgcgaccccg
atcccgcgcacgctcgaaatggcggtgacgggcatccgggagatgtcgacgctcgcgacg
ccgcccgaggaccggcacccgatcctcaccttcgtcggcccgcgcagcgacaagcagatc
acggctgcgatccgccgcgagatgctgcgggaggggcaagtcttcttcgtgcacaaccgg
gtgcagtcgatcggacgggtcgccgcgcacatcgcggagctcgtacccgaggcgcgcgtg
gccgtggcgcacgggcgactgagcgagcaccagctcgagcaggtcgtgcaggacttctgg
gagcgcaagttcgacgtgctggtctcgaccaccatcgtcgagaccggtctcgacatcgcc
aatgcgaacacgatcatcatcgacggcgccgacaagtacggtctgagccagctgcaccag
ttgcgcggccgggtggggcgcagccgcgagcgtgcctacgcctacttcctctacgacccc
gagaagccgctcaccgagcacgcgcacgagcgtctcgagaccctggccgccaacaacgag
ctcggatcgggcatgcaggtggcgctcaaggacctcgagctgcgcggtgccggcaacctg
ctgggcggcgagcagtcgggccatatcgcgggggtggggttcgatctgtacctgcgcatg
atcggcgaggcggtgaacaccttcaagggcgaggaatcgaccggtccggtcgagctggtg
ctcgagctgcccgtcgacgcgcacattcccgaggagtacgtcgagagcgagcgcctgcga
ctcgaggcctaccagaagttctcggcggcctcgcacccgcatgcgcccgacgaccacgta
tcgctcgtgctcgaggagctggccgaccgctacggcgagcccccggccgaggtgcagcgc
ctggcggcggtgtcggcgctgcgccggcgagccgcgaagctggggctgtcgaaggtcgtc
gcggcggggcccgcactgcgcatcgaacccgtcaagatgctcgactctcggcgcatgcgg
atgaaccgcatgtacccgggtgctcggtacacggaggccaccggcgcgctgcagatcccg
ctgcccggcggcacggcatcgtcgcgcagtccgctggccggggtggggcagaagcgcgtg
ggcgacgagagcgacatcgtcgcctggaccggtcgtgtgctcgcaacgctgctcgaggag
gacgcgggaacgggatcctga
DBGET
integrated database retrieval system
