Lachnoanaerobaculum umeaense: D4A81_09295
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Entry
D4A81_09295 CDS
T05639
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lua03009
]
D4A81_09295
Enzymes [BR:
lua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
D4A81_09295
Ribosome biogenesis [BR:
lua03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D4A81_09295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_11
N6_N4_Mtase
PrmA
PCMT
Methyltransf_32
Ubie_methyltran
UPF0020
Methyltransf_12
Met_10
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AYB00117
UniProt:
A0A385Q210
LinkDB
All DBs
Position
complement(2018034..2019461)
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AA seq
475 aa
AA seq
DB search
MKKGDICKGTIVESCFPDSAYIEYEGEKILIKKGILGQTLEFAITKKKKGRLEGRVLNII
EKSKLENNENPCIHYELCGGCTYQTLSYENQLKLKDKQLRELMEGATDKDFKWEGVIPSP
KYLAYRNKMEFSFGDERKDGDLALGMHKKGSHYDIVNVFECKIVDSDFTKILELTLNFFK
ERKISYFHKNSHIGFLRHLLIRRSEHTGEILVSLVTTSSFGFVEDPNTLPKPSVLGTDEE
IVIKEWADYIKLETDKGILNGSIGGILHTKNDSYADAVLNQGTTLLHGKDYIIERLNGLD
FKITPFSFFQTNSKGAEVLYNVTGKYLGDTAGKSVFDLYSGTGTIAQLLASESEKVYGVE
IVEEAVEAAIENAKKNGLDNCEFIAGDVLKVVDTLGFNPDIIILDPPRDGIHPKALPKIL
EFGAKKIVYISCKPTSFVRDLKIMEAAGYRMEKCVGVDMFPNTVNCECVVLLSRP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatatttgtaagggtacgattgtggaaagctgctttccggatagtgca
tatatagaatatgaaggggagaagatactgataaagaaagggattctgggccagactctg
gagtttgccattacaaaaaagaaaaagggaagacttgagggcagggttttaaatataatt
gaaaaatccaaactggaaaacaatgaaaatccatgtatacattatgagttatgtggagga
tgtacttatcaaactttaagctatgagaatcagttaaaactaaaggataaacagttgaga
gaacttatggaaggtgctacagataaggattttaaatgggagggagttattccatctcca
aagtatctggcatacaggaataagatggagttttccttcggtgatgagagaaaagacggt
gatttggcacttggtatgcataaaaagggaagtcactatgatatagtgaacgtgtttgaa
tgtaagatagtggacagtgattttacaaaaatacttgagcttacattaaatttctttaag
gaaagaaaaatatcatatttccataaaaacagccatataggttttttgagacatttactt
attagaagaagtgagcataccggagagattctggtatctcttgtaactacaagtagcttt
ggttttgtagaagatccaaatactttgccaaagccttcagtactgggaactgatgaagag
atagttataaaagaatgggcggactatataaagttagaaacggataagggaatcctaaat
ggcagcatcggaggaattttacatacaaagaatgattcatatgctgatgcagtactcaat
caaggtacaactctattacatggtaaggactatattatagagagattaaatggacttgat
tttaaaataactcctttctcattttttcagaccaattccaagggtgcagaggttttatac
aatgttacaggaaagtatcttggagatacggctgggaaatctgtattcgatctttattcc
ggtacaggaactattgcacagcttcttgcatccgagtcggaaaaggtctatggtgtggaa
attgtagaggaggctgtagaagcagctatagaaaatgctaagaaaaacggactggataat
tgtgaatttatagcaggggatgtgttaaaagttgtggatactttgggctttaatccggat
attataatactggaccctcctagagatggtatacatccaaaagcattgccaaagatactt
gaatttggtgcaaagaaaatcgtgtacatttcctgcaaacctacatcatttgtgagagat
cttaagataatggaggcagcgggatatagaatggaaaaatgtgttggagtagatatgttc
ccaaatacagttaattgtgagtgtgtagttctcttgtctagaccgtag
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