Lachnoanaerobaculum umeaense: D4A81_12805
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Entry
D4A81_12805 CDS
T05639
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lua
Lachnoanaerobaculum umeaense
Pathway
lua00521
Streptomycin biosynthesis
lua00523
Polyketide sugar unit biosynthesis
lua00541
O-Antigen nucleotide sugar biosynthesis
lua01100
Metabolic pathways
lua01110
Biosynthesis of secondary metabolites
lua01250
Biosynthesis of nucleotide sugars
Module
lua_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D4A81_12805 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D4A81_12805 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D4A81_12805 (rfbC)
Enzymes [BR:
lua01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D4A81_12805 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
AYB00733
UniProt:
A0A385Q335
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All DBs
Position
complement(2754659..2755213)
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AA seq
184 aa
AA seq
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MGKITLERCEIEGLCVITPTVFKDDRGYFVETYNQNDFKEAGLDMVFVQDNQSKSSKGVL
RGLHFQKEHPQGKLVRVLSGEVYDVAVDLRKNSKTFGKYFGVLLSDENKKQFYIPEGFAH
GFVVLSDEAVFAYKCTDFYHPNDEGGLIYNDPDIGIDWPIEGINLIMSEKDTKWKGLKET
FKFD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcacattagagagatgcgaaatagaggggttatgtgtaattactcctaca
gtgtttaaagatgatagaggatattttgtagaaacatataatcagaatgatttcaaagag
gcaggacttgatatggtttttgtacaggacaatcagtcaaagtcatctaaaggagtactt
cgtggattacatttccaaaaggagcatccacagggaaagcttgtaagagtattaagtggt
gaagtatatgatgtggcagtggatctgagaaagaactcaaagacatttggaaagtacttt
ggtgtacttctttctgatgagaacaagaagcaattctatataccggaaggttttgcacat
ggttttgtggtactttcagatgaggcggtatttgcatacaaatgtacagacttctatcat
ccaaatgatgagggtggtcttatatacaatgaccctgatataggcattgactggcctata
gagggaattaatctgataatgtctgagaaggatacaaagtggaaaggtcttaaagaaaca
tttaagtttgattga
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