Lysobacter oculi: DCD74_08405
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Entry
DCD74_08405 CDS
T05527
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lue
Lysobacter oculi
Pathway
lue00521
Streptomycin biosynthesis
lue00523
Polyketide sugar unit biosynthesis
lue00541
O-Antigen nucleotide sugar biosynthesis
lue01100
Metabolic pathways
lue01110
Biosynthesis of secondary metabolites
lue01250
Biosynthesis of nucleotide sugars
Module
lue_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DCD74_08405 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DCD74_08405 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DCD74_08405 (rfbC)
Enzymes [BR:
lue01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DCD74_08405 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXA84705
UniProt:
A0A344J6P5
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Position
complement(1739542..1740099)
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AA seq
185 aa
AA seq
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MKVIETDLPGCLIFEPRVFGDDRGFFFESFNADKLATLGLDLQWKQGNVSSSAQGVLRGL
HYQWPKPQGKYVSVVEGEVWDVAVDIRRGSPTFGKWTAVVLNAESKRHFWIPEGFAHGFV
TLSERAVFTYLCTETYDAQADANISWNDAQLAIDWPVASPSLSAKDLVAPFLADIPQDRL
PRYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtcattgagacggatcttccgggctgcctgatcttcgagccgcgcgtattcggt
gacgaccgcgggtttttcttcgagtccttcaatgcggacaagctggcaacgcttgggctg
gacctgcagtggaagcagggcaacgtctcgtcgtccgcgcagggcgtgttgcgcggcctg
cactaccagtggccgaagccgcaggggaagtacgtatccgtggtggaaggcgaggtctgg
gatgtcgcggtggatatccgtcgcggatcaccgacgttcggcaaatggaccgcggtcgtg
ctgaatgcagaaagcaagcgccacttctggataccggaaggcttcgcccacggcttcgtg
accctgagcgagcgagcggttttcacctacctgtgcaccgaaacgtacgatgcgcaggcc
gacgccaacatctcctggaatgatgcccagctggcgatcgattggccggtagcgtcgccc
tcgctgtcggcgaaggatctggtcgcgccgttccttgcggacatcccccaagaccggctg
ccgcgctacacgccatga
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