Luteimonas chenhongjianii: CNR27_10900
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Entry
CNR27_10900 CDS
T05077
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lum
Luteimonas chenhongjianii
Pathway
lum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNR27_10900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lum03019
]
CNR27_10900
03009 Ribosome biogenesis [BR:
lum03009
]
CNR27_10900
Enzymes [BR:
lum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNR27_10900
Messenger RNA biogenesis [BR:
lum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNR27_10900
Ribosome biogenesis [BR:
lum03009
]
Prokaryotic type
rRNA helicases
CNR27_10900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Flavi_DEAD
DUF6702
Motif
Other DBs
NCBI-ProteinID:
ATD67871
UniProt:
A0A290XFM9
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All DBs
Position
2395966..2397819
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AA seq
617 aa
AA seq
DB search
MSAESPITPDESPKFTDLNLPEPLLRALAAVGYESPSPIQAATIPPLLAGRDVLGQAQTG
TGKTAAFALPVLARIDPAQRKPQALVLAPTRELAIQVAEAFHKYAAFMPGFQVLPIYGGQ
GYAQQLSALKRGVQVIVGTPGRVIDHLERGSLDLSELRALVLDEADEMLRMGFIDDVEAV
LKKTPESRQVALFSATMPQQIRRIAQTYLKDPVEIAIKSTTTTAANIRQRYWMVSGVNKL
DALTRILEAEPFDAMIIFARTKLGTEELAQKLAARGLSAAAINGDLDQKQRERAIQNLKD
GRLDVLVATDVAARGLDVDRISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVAPRE
RGMLGAIERATRQKIEQMQLPSVETVNEARVAKFLEKITTALESSDLGIFRDLIERYERE
HNVPAAEIAAALAKVVQGSTPLLLEPPRKPEKPAFEREYVERPGGREASRSAREPREPRE
PREPRAPRPDTGPRDPDVGMETFRIEVGYVHGVQPGNIVGAIANEADLESKFIGRIDIRD
DYSLVDLPEGMPKELLEHLKKVRVGGQPIRIRRAEDADMTAAPPRAKRPFGAKPPGNRPG
GFKPGGPRKGPPRRDPR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgagtcgcccatcacgcccgacgaatcccccaagttcaccgacctcaacctg
cctgagccgctgctgcgcgcgcttgccgcggtcggctacgaatcaccctccccgatccag
gccgcgacgatcccgccgctgctggccggccgcgacgtgctgggccaggcccagaccggc
accggcaagaccgccgcgttcgcgttgccggtcctggcccgcatcgatcccgcgcagcgc
aagccccaggcgctggtgctggcgccgacccgcgaacttgcgatccaggtggccgaggcc
ttccacaagtacgcggcgttcatgcccggcttccaggtgctgccgatctacggcggccag
ggctatgcccagcagctcagcgcgctcaagcgcggcgtgcaggtgatcgtcggcacgccg
ggacgcgtgatcgaccatctcgagcgcggctcgctggacctgtccgaactgcgcgcgctg
gtgctcgacgaagccgacgagatgctgcgcatgggcttcatcgacgacgtcgaggccgtg
ctgaagaagacgcccgaatcgcgccaggtcgcgctgttctcggcgacgatgccgcagcag
atccgccgcatcgcccagacctacctcaaggatccggtcgagatcgcgatcaagtcgacg
acgacgaccgcggccaacatccgccagcgctactggatggtcagcggcgtcaacaagctc
gacgccctgacgcggatcctcgaggcggagcccttcgacgcgatgatcatcttcgcccgc
accaagctggggaccgaggaactggcacagaagctggcggcgcgcgggctgtcggctgcg
gcaatcaatggcgacctggaccagaagcagcgcgagcgtgcgatccagaacctcaaggac
ggccgtctcgacgtgctggtggcgaccgacgtggccgcccgcggcctggacgtcgaccgc
atcagccacgtgctcaattacgacattccatacgacaccgagagctacgtgcaccgcatc
ggccgcaccggccgcgcgggtcgcagtggcgaggccatcctgttcgtcgccccgcgcgaa
cgcggcatgctcggcgccatcgagcgcgccacgcggcagaagatcgagcagatgcagctg
cccagcgtcgagacggtcaatgaagcgcgcgtcgccaagttcctcgagaagatcacgacc
gcgctggaaagcagcgacctgggcatcttccgcgacttgatcgaacgctacgagcgcgaa
cacaacgtgcccgcggccgagatcgcggccgcactggccaaggtggtccagggcagcacg
cccctgctgctcgagccgccgcgcaagccggaaaagccggcattcgagcgcgagtacgtc
gaacgtccgggtggccgcgaagcgtcgcgttcggcgcgcgagccgcgtgagccgcgtgag
ccccgcgaaccgcgcgcaccgcgtccggacaccggcccgcgcgacccggacgtcggcatg
gaaaccttccgcatcgaggtcggctacgtgcacggcgtgcagccgggcaacatcgtcggc
gcgatcgccaacgaagccgacctggagagcaagttcatcggccgcatcgacatccgcgac
gactacagcctggtcgacctgcccgaaggcatgcccaaggagctgctcgagcacctgaag
aaggtccgcgtcggcggccagccgatccgcatccgccgtgccgaagacgccgacatgacc
gccgcgccgccgcgtgccaagcgcccgttcggcgccaagccgccggggaacaggccgggg
ggcttcaagccgggtggcccgcgcaagggaccgccgcgtcgcgacccgcgctga
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