KEGG   Luteolibacter luteus: HHL09_07690
Entry
HHL09_07690       CDS       T06562                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
luo  Luteolibacter luteus
Pathway
luo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:luo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    HHL09_07690 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:luo03400]
    HHL09_07690 (ligD)
Enzymes [BR:luo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HHL09_07690 (ligD)
DNA repair and recombination proteins [BR:luo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     HHL09_07690 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase FAD_binding_9 DNA_primase_S
Other DBs
NCBI-ProteinID: QJE95671
UniProt: A0A858RGF4
LinkDB
Position
complement(1867915..1870260)
AA seq 781 aa
MPRKPPAKKQPARKPAQLEPYRKKRNFKATPEPAAGRGKKEGRIFVVQEHDASHHHFDFR
LEMNGVLASWAVPKGIPEDIHAKRLAVHVEDHPVSYASFHGVIPKGNYGAGTVDIWDSGT
WEPLDRDWRKAYEKGKLKFILRGKRLEGPYLLARMSAEPNWLLRKLDPETHPTGTPVEPT
AEAVAFVLPQLSRPVPTVPEGKEWVHEIKLDGYRLIAVRKKGEVKLYTRKQLDWTDRFAD
VASRLEKLKGGDFVMDGEAVVFNSKGHSSFSALQEALKSGKGRAITFVAFDLLNLDGRNL
KELPLVERVKYLAKLLPEEQGPLRRSKVWPADSGADLFLQACKLGLEGIISKRASGRYVP
ESRKDWTKSKCRPRQEFVICGYTEPRNSCPAFGALVLASYENGKLIPRGKVGTGFSDESR
RSLLKQMASRKMPRGPFPGEKGVTWIKPDLVAEIEFAELTHEGSIRQGSFLSLREDKPAS
DVHLDAVEKASAKGKGVTVAGIEITHPERVVYSDDSITKLEVARYYERVGELILPHLKDR
PLALLRAPDGIGSDMFFQKSFKAHVPPHVKMSTLDDGTEVISIKNLKGLISLVQFGVIEI
HPWGASLAKPDKPDQIIWDLDPDKSVPWKEVLGAAFLLRDVLEARGLQTLVKTSGGKGLH
VVLHLKRQHSWEVMKSFAKGVAASVAEQNPQRFTITSSFKKRGGKIYIDWLRNGRGATCI
APWALRARPGAAVSMPLEWDQLPGLEAQGFTIREPAETPASWLNIISQSVPKALLAEFAS
L
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgccaagaaagccgccagcaaaaaaacagcccgcaagaaagcccgctcagcttgagccg
taccgcaagaagcggaacttcaaggcgaccccggagcctgccgcgggtcggggcaagaag
gaggggcggatcttcgtcgtgcaggaacatgatgccagccatcatcactttgatttccgt
ctggagatgaatggagtgcttgccagctgggcagtgccgaaaggcattcccgaagacatc
catgccaagcgtctggcggttcacgtggaagatcacccggtaagctatgcttcgtttcac
ggcgtgattcccaaagggaactacggagcgggaaccgtcgacatctgggatagtggaacc
tgggaaccgctcgaccgcgattggcgtaaagcctacgagaagggcaagttgaagtttatc
ctccgcggcaaaagattggaggggccctatcttctcgcaagaatgagtgcagagccaaat
tggctgctgcgaaagctggatccggagacgcatcctaccggaacgccggtcgaacccacc
gcggaagccgtggcgtttgtcctcccgcagctttcccgaccggtgccaacggtgccggaa
ggcaaggaatgggttcacgagatcaagcttgatggctaccgcttgatcgccgtgaggaag
aaaggtgaggtaaagctctacacgcggaagcaactggattggacggatcgtttcgcggat
gtcgcgagccgcctggagaagctgaaggggggggatttcgtgatggatggagaggcggtg
gtcttcaattccaagggtcactcgagtttcagtgcacttcaggaggcattgaagtcgggg
aagggcagggccatcaccttcgttgctttcgatcttttgaacttggatggaaggaatttg
aaagagttgccccttgtggagcgcgtgaagtacttggcgaagttgcttcccgaggagcaa
gggccgttgcgccgctccaaggtttggcccgccgacagcggtgccgatcttttcctccaa
gcgtgcaagctggggctcgaagggatcatcagcaaacgggcaagcgggcgatatgtcccg
gagagccggaaggattggacgaagtcgaaatgccgtccccgccaggagttcgtcatctgt
ggctacacggagcctcgaaattcttgtcccgccttcggggccctggtgttggcatcctat
gagaatgggaagctgatcccgagaggcaaggtgggcactggattctccgacgagtcgcgg
cgctcgctcctcaagcagatggcctcgcggaagatgccgcgcggtccttttcccggggaa
aagggcgtgacgtggatcaagccggaccttgtggccgagatcgaattcgctgagttgacc
catgagggttcaatccgccagggaagtttcctctcattgcgggaagacaaaccggcaagc
gacgtccatcttgatgccgtggaaaaagcatccgccaagggcaagggagttaccgttgcc
gggatcgagatcacgcatcccgagcgcgtcgtttattccgacgactcgatcaccaagctg
gaggtcgcgcgctactacgagcgggtgggggaactcatcttgccgcatttgaaggaccgg
ccgcttgcccttctgagggctcccgacgggatcggcagtgacatgttcttccaaaagagc
ttcaaggcgcatgttccgccgcacgtgaagatgagcacgctggacgatggaaccgaggtg
atctccatcaagaacttgaagggcctcatttcccttgtgcaattcggagtgatcgagatc
cacccttggggtgcgtctttagcgaagcccgacaagcctgatcagatcatctgggatctc
gatcccgacaagtcggtgccttggaaagaggtgctgggcgccgcttttctcctgcgggac
gttcttgaggcgcgcggtctccagaccttggtgaaaacttcaggcggcaagggacttcac
gtggtgctccacctcaagcgccagcactcttgggaagtcatgaaatcttttgcgaaaggg
gtggctgcctccgtcgcggaacagaatccccagcgcttcacgatcacctccagcttcaag
aagcgcggcgggaagatctacatcgactggctccgcaatggccgcggtgccacttgcatc
gcgccatgggctttgcgcgcccgaccaggggccgcggtttccatgccgctggagtgggat
caacttccgggcttggaggcccaaggtttcaccattcgtgaaccggcggaaactccggcg
agttggctgaatatcatttcccagtccgtcccgaaggcgctgctggctgagtttgcctcg
ctgtag

DBGET integrated database retrieval system