Lutibacter profundi: Lupro_10610
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Entry
Lupro_10610 CDS
T04235
Name
(GenBank) LuxR family transcriptional regulator
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lut
Lutibacter profundi
Pathway
lut02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lupro_10610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lut03021
]
Lupro_10610
Transcription machinery [BR:
lut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Lupro_10610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_5
HTH_11
HTH_23
HTH_40
Arc_PepC
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AMC11690
UniProt:
A0A0X8G7X6
LinkDB
All DBs
Position
2407305..2407904
Genome browser
AA seq
199 aa
AA seq
DB search
MKRNFEENANLIFHLKKGNEQAYSFLVNYYNHRLCVYANSLINDKSLAEDIVQNVFIKTW
EKRKFLIEDFSIRSFLYKSVYNEYIDQYRKNRSVTLLEKKYIEALDTIVEEDYSVLEKLY
IMVQKEVHNLPPKCKNVFLLSKQEGLSNIEISEHLNVSVKTVESHITKAFCLIRERVNVK
IHTITAFFILFDENKPISH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtaattttgaagaaaatgccaatttaatttttcacttaaaaaaaggtaatgaa
caggcgtattcttttttagtaaattactataatcacagattatgtgtttatgctaatagt
ttgataaatgataaatctttagcagaagatattgtacagaatgtatttataaaaacttgg
gaaaagcgaaaattcctaatagaagatttttcaatacgaagttttttatacaaatctgtt
tataatgaatatattgatcaatacaggaagaaccgctcggttactttattagaaaaaaaa
tatattgaagctttagatactattgtagaagaggattattctgttttagaaaaactgtat
ataatggttcaaaaagaagtgcataatttgccgccaaaatgcaaaaacgttttcttattg
agtaagcaggagggattgagtaatatagaaatttcagaacaccttaatgtttctgtaaaa
acagttgaatctcatattacaaaggcattttgccttattcgtgaacgggtaaacgtaaag
attcatacaattactgcattttttatattgtttgatgaaaataaacctatttcacattaa
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