Lipotes vexillifer (Yangtze River dolphin): 103070228
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Entry
103070228 CDS
T03090
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103070228 (CHD6)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103070228 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
103070228
NCBI-ProteinID:
XP_007464807
UniProt:
A0A340XX57
LinkDB
All DBs
Position
Unknown
AA seq
2720 aa
AA seq
DB search
MIMKIQKKEKQLSDLKVLNHSPMSDASVNFDYKSPSPFDHSTDQEDKTEDVACPCLPQKD
LHAAEEDAETLFPRKTSSHNGTEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEPRKAKEPRKAKEPKEPKQKDGAKKVRKPREASGPKEAKEKRSGPDSAARTK
SKKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQVEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEVKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLVFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDCVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNTDKEDNTEDKVDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRSSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFH
SFVAMCRHVCHLPAWKDGGPPDPSICVEPITEERAARTLYRIELLRKVREQVLQCPQLHE
RLQLCRPSLSLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDPQAPGSLCCLYQTNSKLYESLAYTQMRRTSESLENEPENLVKIEGRDDHLGPPRGSLS
DMTCENFISKVQDVISITHDESLLPESLESMMYGKKALSQEPVSFQESPGTNTESRQDAV
ALTTSRDGNFQPGGQEAEIASGPSFMDTLEAGVAQMNIKNGKHLLVSLSQEGELCCSEAG
QRPESLGQMETKCIASPSLDQGNESGFVDMCNLSVYDSKRNLSSDQQLIDLLECKSLESK
LILGRNHSDEEEEEEENEEENLDLAAGPQERPEVSPPTEPTARMAGQKSRSGFLVDEAKK
GSLAARSQHPGPQGAFLPAACQCHCKHMERWTHGLENDQFEVEKPQGYNPDPYKSKANNV
AVRGELTALPPELFQVKHELLKEPWKESAEGKQGFATYLEGSELKAEDVDFESKDDYDRD
GNCQSQDYPGKYSEEESKNSTSGIAGGLRDSLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSNQQYEPSAALPTPVLTSGAGPRSSRSEPEASEHVFSSGAAL
VAQMQKESFLASVFTKDEQKHRRPYEFEVERDTKTRGLEQFPATHGHPPIVLNGWHGEPA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAATRRRRGRRKHVDGGVDLIFLKEPTLQAGILEVHEDPGQAPLSTSHPPEGPVPA
TSTPEPAPVAGSQAEKAIPSKSLLDWLRQQADCPLEVPGFGANFSDKPKQRRPRCKDTGK
LDVSSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDSGPRRRGRRPRSELLKAPA
LVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMPSIPLTGLVGFPAGFAAMPTGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNAPMATTCASAVPAPLSSTTKSGSPAAEKTAEDQPSG
RDVKTDTSAEDKPGPSPFSDQAEPPITTSSPVAFNPFLIPGVSPGLIYPSMFVSPSMGMA
LPAMQQARHSEIVGLESQKRMRKKTKGDNPDPSPEPASGLEREPGGAQSCPESRAPAPPE
RGHTAQAGEGGPQDSNSVTN
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcagatttaaaagttctgaatcac
tccccaatgtctgatgcctccgtcaattttgactacaaatccccctccccgtttgaccac
agcactgatcaggaggacaaaactgaagatgttgcctgtccctgtctgccccagaaggac
ctgcacgctgctgaagaggacgctgagacccttttccccaggaaaacgtcatcccataac
gggacggaggacagtggaggaggaggcactggcgtgaagaagaaacggaagaaaaaggat
ccaggagagcaagaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgtgaacctagagagccaaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccaaggagcccaagcagaaggacggggccaagaaggtgcggaagccccgggaggcc
tcgggccccaaggaggccaaagagaaaaggagcggccctgactctgcagccaggacgaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaag
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaggacctggacttcaaagtggtggatgatgatggg
gaaaccatcgctgtccttggagccggccggacatctgccctctcagcttctacactggct
tggcaggtggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggttcacccgggagaacccccattcgacttggagctgttctacgtc
aagtataggaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactacgtggaggttgatcgcatc
ttggaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagaaagtacatgggaactggaggaagacgtggatcct
gcgaaagttaaagaattcgaatctctgcaagttctccctgaagttaagcatgtggagcga
cctgcctcagactcctggcagaaacttgagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacaggaaa
aactgcattttggctgatgagatgggcctagggaagaccatccagtccatcacattcctt
tcagaaatattcctcaggggaatccacggccctttcctcatcattgccccgctctccacc
atcactaactgggagcgggagttccggacatggacagagatgaacgccatcgtgtaccat
ggcagccagatcagcaggcagatgatccagcagtatgagatggtgtaccgagatgcacag
ggaaacccactgtcaggagtcttcaagttccatgttgtcattacaacgtttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcattgatgaagcc
cacagactgaagaacaggaactgcaaacttctggagggcctgaagctcatggccctggag
cacaaggtgctgctcacagggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccgtcacagtttccttcagagactgctttcttggaggagtttgga
gatctgaaaacagaggagcaggtaaagaaactgcagtctatcctcaaaccaatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcccaaacaagagacaattatcgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggagccaatcagcacaacatgcccaatctcatcaacactatgatggag
ctgaggaagtgctgtaaccacccctacctgatcaacggggcagaggagaaaattctggag
gacttccggaaaacccacagcccagatgcccccgacttccagctgcaggccatgattcaa
gcagcagggaagctggtgctgattgataaactgctccctaagctgattgctggcggccac
aaagtactcatcttctctcagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcattacacggaactcctacgagcgggaaatgtttgacaag
gccagcctgaagctgggtctggacaaggctgtccttcaggacatcaaccgaaagggcagc
acgaatggggtacagcagctttcaaaaatggaggtagaggacttgctccggaaaggtgct
tacggtgccctaatggatgaggaagacgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatccact
tttgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gaaagcttagtgatcgaccgcccgcgcgtgaggaagcagaccaaacactacaactctttt
gaggaggatgagctcatggagttttcagagttggacagtgactctgatgagaggcccacg
aggtccaggcgcctcaatgacaaaacccgacgctacctccgagccgagtgcttccgggtg
gagaagaacctgctcgtctttggctggggccggtggaaggacattctgacccatggacga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgggccctgctggtgtac
tgtgtcaagcactacaagggggacgagaagatcaagagtttcatttgggaactgatcacg
cctaccaaagatgggcaggcccagaccctccagaaccactcagggttgtccgctccagtc
cccagagggaggaaggggaagaaaacgaagaaccagctgctgctcccagagttaaagaac
gcagactggcttgccacctgcaaccccgaggtggtcttgcacgatgatggctacaagaag
cacctcaaacagcactgcaacaaggtactattgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagcggataaagcatttgaaggaactccggccagggagctg
gacgtgcctctgcccgacatcgactgcgtggagatcccagtggattggtgggatgccgag
gccgacaagtcacttctgattggcgtgttcaaacatggttacgagaggtacaatgccatg
agagcagacccagcactttgcttcctggagaaggttgggatgccagacgagaagtccctt
tctgcagagcagggtgttacagatgggacctcagacattcccgaaagaggcaacacagat
aaagaagacaatacagaagacaaagtagatggcctccagaaacaaatggagagttccagt
gatggaggtgatggcatttttggtgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagtttcgtctgcactcacagctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccgacctgaaatcctggga
ccaggaaaccagggatactgggtccaggaagagatgttccggaggtcctcagagatggat
ctcatcaacaaggaagcccaaaagaggtggactaggagagagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagaaaagaaaacctttgactggacgcag
tttcgcatcatttcccgtttggacaagaagtcggacgagagcctggagcactatttccat
agcttcgtggccatgtgccgccacgtctgtcatctgccagcctggaaggatggtggcccc
ccagatcccagcatctgcgttgaacccatcactgaagagcgggccgcgagaaccctgtac
cgcattgaactgttgcggaaggtccgggagcaagtgctgcagtgtcctcagctgcacgag
cgccttcagctctgcaggcccagcctctccctccccgtctggtgggagtgtggaaagcac
gatcgggacctgttgatcggcactgccaagcacgggctcaaccgcaccgactactacatc
atgaccgacccccagctgtccttcctggacgcctacagaaactatgcccaacacaaaaga
accgacccccaggctccagggagtctctgttgcctttaccagaccaactccaaactgtat
gaatctcttgcatatactcaaatgaggaggacttccgagtcccttgaaaatgaacctgag
aatctagtgaaaatagaaggtagggatgatcatcttggtccacctcggggcagcttatct
gacatgacttgcgaaaactttatttctaaagttcaggatgtcatttccatcacccatgat
gagagtctgctgcctgagtccttggagagcatgatgtatggtaagaaagcactaagccag
gagccagtctcttttcaggagagcccaggcaccaataccgagtccagacaagatgccgtg
gctctcacaacaagcagagatggcaacttccagcctggcggccaggaggcagaaatagcc
tcaggcccctcttttatggatacattagaagcaggagtagctcaaatgaacattaaaaat
ggaaaacatttgctggtgtctctttcacaggaaggggaactctgctgcagcgaggcaggg
cagagacctgaaagccttgggcagatggaaaccaaatgcatagcctccccttccttggac
caaggaaatgagagcgggtttgttgacatgtgcaatctgagtgtctatgactccaaaaga
aacctgtcatcagatcagcagttaattgatttattagaatgcaaaagtttagaaagtaaa
ttgattttgggtcggaaccacagtgatgaggaggaagaagaggaggaaaatgaggaggaa
aacctagacctggccgcaggcccgcaggaaaggccagaggtgtcgcctcctaccgagccc
actgctcgtatggcagggcagaagagccgcagcggctttcttgtggacgaagccaagaaa
ggaagcctggcggccagaagccagcatcctggaccgcagggcgcttttcttcccgcagcc
tgtcagtgtcactgcaaacacatggagaggtggacgcacggcctcgagaatgaccagttt
gaagtggagaaaccccagggttacaacccagacccatataaaagcaaagccaataatgtc
gcagtgcggggcgagctcactgctcttccgccagagctgtttcaggtgaagcatgaactt
ttgaaagaaccctggaaagaaagtgcagaagggaaacaaggtttcgctacatatctggaa
gggagtgaactcaaggcggaagacgtggattttgagagtaaagatgattatgatagagac
gggaactgccagagtcaagattatccagggaaatactcggaggaggagagcaagaactcg
acctcgggcatcgcagggggcctcagggacagcctgcaggaggcacgggctcccaccatt
gcgcagctgctccaggagaaaaccctctattccttctccgagtggccaaaggatcgcgtg
ataatcaaccgcctggataacatctgccatgtggtgttaaaggggaagtggccctccaac
cagcagtatgagccctcggccgcactgcccacccccgtgttaaccagcggcgctggtccc
cgcagcagccgttcagagccagaggcatcagaacacgtcttcagcagtggcgcagcgttg
gtggcccagatgcagaaggagagcttcttggcttcggtattcacaaaggatgaacagaag
cacaggcgtccttatgagttcgaggtggagagggacacaaagacccggggcctggagcag
ttccccgccacccacgggcacccccccatcgtcctcaacggctggcacggagagccagcg
atagacctctcctgcccatcggaggggtccccgggggccacatcccctttcccagtgagc
gccagcacccctaagattggggctatcggctcacttcaaggagcccttggcatggacttg
tctgggattctgcaagccggcctgatccatccagtgactggacagatcgtcaacggaagc
ctcaggagagatgatgctgccaccaggaggcggagagggaggcggaagcatgtagatgga
ggcgtggacctcatctttctgaaggagccgacactccaggcggggatcttggaggtccac
gaagacccagggcaggcccccctgagcacctcacaccctcctgaagggccagtgcctgcc
acttcgaccccggagccggccccggtagccggcagccaggccgagaaagccattcccagt
aagagcctgctggactggctgcggcagcaggctgactgccccctcgaggtccctggcttt
ggcgcgaatttttcagacaaacccaagcagaggaggccacgctgtaaggatactggaaaa
ttagacgtcagctccctgagtggggaagagagggttcctgccgtccccaaggagccaggc
ctgagggggtttctcccggaaaacaagttcaatcacacccttcctgagcctgttctccga
gactcaggcccccgccggaggggcaggcggccccggagcgagctcctgaaggctcccgcc
ctcgtggcggactccccctccgggatggggcctctcttcatgaacggcctgatcgccggg
atggacctggtcggacttcagaacatgagaaacatgcccagcatccccctcacggggctg
gtggggttcccggctggctttgcagcgatgcccacgggcgaagaggtcaagagcacgctg
agcatgctgcccatggtgctgccggggatggccgccgtgccccagatgtttggggtcggg
gggctcctcaacgcccccatggccaccacctgcgcctcggctgtgccagcgcctttgtca
agcacaacgaagagtggatcgccggcggctgaaaagactgcagaagaccagcccagcggc
cgtgatgtcaaaacggacacatcagccgaagacaagcccggtcctagtccattttccgat
caggccgaacccccaataactacgagtagtcctgtggcttttaacccgtttctcatccca
ggagtgtcccccggactcatttacccatccatgtttgtctcccccagcatgggcatggct
ctgccggccatgcagcaggccagacactcggaaatagtaggtctggagagccagaagagg
atgaggaagaaaacaaaaggggacaacccggaccccagcccagagcctgcatccgggttg
gagagggagccgggcggtgcccagagctgccccgaatccagggcccccgcgcctccagag
agaggacacacagcacaggccggcgaagggggcccccaagactctaacagtgtcaccaat
tag
DBGET
integrated database retrieval system
