Lipotes vexillifer (Yangtze River dolphin): 103076607
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Entry
103076607 CDS
T03090
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103076607 (SCN10A)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103076607 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
CcmD_alt
Na_trans_cytopl
IQ
Motif
Other DBs
NCBI-GeneID:
103076607
NCBI-ProteinID:
XP_007468214
UniProt:
A0A340Y8T8
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MEFPFGSLETTNFHRFTPESLVEIEKQIAAKQEAKKAKEKSKKQKDQEEKTRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNDTANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALQMLRTEQEVLAALGVDTASLHSHSGSPLASKNASVRRHRMKPRVSE
GSTDDNKSPQTESYNEHRMSFLGLTSGRHQASHGSAFHFQAPGRDISFPDGVTDDGVFPG
DCESHRGSLLLGRDASQQGPLPRSPLPHTPSPGLGHGEDGPPTLPTGELAPGAIEVSASD
AGQKTYLTAEYLNEPFRTQRAMSVVSIMTSVLEELEESKQRCPPCLTSLARKYLIWDCCP
TWVKLKTLLFAIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIAFDPYYYFQKKWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRRKISAPNEEWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDGEVNNLQVALARIQVLGRRTKKALCSFLNWPFLLPPPKAEPQLVV
KLPLSTSKAENHITADTAAESPGGLLAPRGPRDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDGEEDAQSTQQEVIPQGQQEQLQQVGRYEDHLPPRSSGSGMSSEDLAPYLGEKWKDEA
PAQGPTEGVDDTSSSEGSTVDCLDLGEILRKIPELADDLDEPDDCFTEGCIRHCPCCKVN
SSKFPWAMGWQVRKTCYVIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYT
DRVFTFIFVFEMLLKWVAYGFKSYFTNAWCWLDFLIVNISLTSLIAKMLQYSDMASIKAL
RTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQK
CINKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGW
MDIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGSFFTLNLFVGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMVLICLN
MITMMVETDEQSEEKTKILNKINQFFVAVFMGECVMKMFALRHYYFTNGWNVFDLIVVVL
SIGSLVFSAILTSLGNLXXXXLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSP
ILNTGPPYCDPNLPNGNGTRGDCGSPIVGILFFTTYIIISFLIVVNMYIAVILENFNVAT
KESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNGNILIQMD
LPLVPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWK
QEDISATVIQKAYRSYVLHRSTTITSAPPVPRAEEEAVSLPDEGFVAFVANENCVLPDKS
ETASATSFPPSYDSVTRGLSDQVNLSTSSSIQNEGEAASKEATGP
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacaaattgctgctaagcaggaggcaaagaaagccaaagagaag
tccaagaaacagaaggaccaggaagagaagactcggccccagcttgacttgaaagcatgc
aaccagctgcccaagttctatggcgagctcccagcagagctggtcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggcatgacccaaacggaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccatagatctccgagggatctcaggcctgcggacgttc
agagtccttagagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggcggacgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaacgatacagccaattactcttctcacgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagctttgactcctttgcttgggcattcctctca
ctgttccgcctcatgacgcaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgtcatcttcctggggtctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttcagatgctccggacggag
caggaggtgctggcagccctgggggttgacacagcctctctccactcccacagtggatcc
cctttggcctccaaaaatgccagtgtgagaaggcatagaatgaagccaagggtgtcagag
ggctccacagatgacaacaagtcaccccagactgagtcttacaatgagcacagaatgtct
ttcctaggcctcacctctgggagacaccaggctagccatggcagtgcgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gactgtgaaagccatcggggctctctgctgctgggtagggatgcaagccagcaaggcccc
ctccctaggagtccactgcctcatactcccagccctggcttagggcatggagaagatgga
cccccaacattgcccactggtgagcttgcccctggagccatcgaagtctcggcatctgat
gcaggacagaagacttacttgacagcagaatacttgaatgaacctttccgaacccaaagg
gcaatgagcgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcggaagtatctgatctgggattgctgcccc
acgtgggtgaagcttaagacccttctctttgcgattgtgacggacccctttgcagagctc
acaatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcccgctttcgaagccatgcttcagattggcaacattgtctttaccgtgttttttacg
gctgaaatggtcttcaaaattatagcgtttgatccctactattacttccagaagaagtgg
aacatctttgattgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaactaccgtgacaaccggcgcaaaatctcagcacccaacgaagaatggccacgc
tggcacatgcacgacttcttccactccttcctcatcgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagtcggccagaagtccatctgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttaggccggcgcaccaagaaggccctttgc
agcttcctcaactggcccttcttgctccccccgcccaaggcagagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacacggctgcggag
agtcctggagggcttctggctcccagaggccccagggatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatggtgaggaggatgctcagagcacccagcaggaagtgatcccccaagggcag
caggagcagctgcaacaagtcgggagatatgaggaccacctgccacccaggagctcaggt
tctggaatgtcctctgaggacctggctccatacctaggtgagaagtggaaagacgaggct
cctgctcagggccctacagagggagtggacgacaccagctcctcagagggcagcactgtg
gactgcctggatcttggggagatcctgaggaagatccctgagctggcggatgacctcgat
gagccagatgactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaac
agctccaagtttccatgggccatgggctggcaggtgcgcaagacctgctacgtcattgtg
gagcatagctggttcgagagctttatcgtcttcatgatcctgctcagcagtggagcgctg
gcctttgaagatttttaccttgaccagaagcccacggtgaaggccttgctggagtacacc
gacagggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggc
tttaaaagttacttcaccaatgcctggtgctggctggacttcctcatcgtgaacatctca
ctgacaagccttatagcgaagatgctgcagtattctgatatggcatccatcaaagccctt
cggaccctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtg
gtggtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgcctc
atcttctggctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaa
tgcatcaacaagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatg
tctgactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaac
tttgataatgttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctgg
atggacatcatgtacgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggag
gacaacgtgtacatgtacttgtacttcatcatcttcatcatttttggcagtttcttcaca
ctcaatctcttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagttaggg
ggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaaactg
ggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtc
tttgacatcgtgaccaggcaaactttcgacatcatcatcatggtcctcatctgcctcaac
atgatcaccatgatggtggagactgatgagcagagtgaagaaaagacaaaaatcctaaac
aaaatcaaccagttctttgtggccgtcttcatgggcgagtgtgtcatgaagatgttcgcc
ttgaggcattactacttcaccaatggctggaatgtatttgacttaattgtcgtggtcctc
tccattggaagcctggtgttttctgcaattcttacatcacttggaaatttattnnnnnnn
nnnctcttccgagtcatccgcctggcccggatcggccgcatcctcaggctgatccgcggg
gccaagggcatccgcacgctgctcttcgcgctcatgatgtccctgcccgccctcttcaac
attgggctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttc
gcctacgtcaagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacgtcggcaggctgggacgggctcctcagcccc
atcctcaacacggggcctccctactgcgaccccaacctgcccaacggcaacggcaccaga
ggggactgcgggagccccatcgtgggcatcctcttcttcaccacctacatcatcatctcc
ttcctcatcgtggtcaacatgtacattgcagtgattctggaaaacttcaatgtggccacg
aaggagagcacggagcccctgagcgaggatgactttgacatgttctacgagacttgggaa
aagttcgacccggaggccacccagttcattaccttctctgccctctcagactttgcagac
acactctctggccccctgcgcatcccaaaacccaatgggaatatattaatccagatggac
ttgcccttggtccctggagataagatccactgtttggacatcctgtttaccttcaccaag
aatgttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaattt
atggcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaag
caagaagacatttcagccactgtcatccaaaaggcctatcgcagctacgtgctgcaccgc
tccacgacgatcaccagtgccccgcctgtgcccagggctgaggaggaggctgtgtcactc
ccagatgaaggctttgttgcattcgtggcaaatgaaaactgtgtgctcccagacaaatct
gaaactgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagt
gatcaagtcaacttaagcacatctagctcgatacaaaacgaaggggaggctgccagtaag
gaagccactgggccctag
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integrated database retrieval system