Lipotes vexillifer (Yangtze River dolphin): 103079166
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Entry
103079166 CDS
T03090
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lve01002
]
103079166 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103079166 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103079166 (USP13)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103079166 (USP13)
Peptidases and inhibitors [BR:
lve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103079166 (USP13)
Ubiquitin system [BR:
lve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103079166 (USP13)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103079166 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
103079166
NCBI-ProteinID:
XP_007466735
UniProt:
A0A340Y5H5
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MQRRGALFGMPGGSGNRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMYLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDLGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLQDNDSKPRISEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPMKSELIEQVMKEEPKPQ
QNGISPRMFKAFVSRSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPVIIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGVASAGASAGL
DNQPPEETVALITSMGFHRNQALQALRATNSNLERALDWIFSHPEFEEDSDFVIEMENNA
NANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCA
SERPPKDLGYMYFYRRIPS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcaacaggaagatggct
gcaggagacatcggcgagctgctggtaccccacatgcccacgatccgcgtgccccggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactcccccaattctgaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggagcatgtggaaagacat
tttcgaaaaactggacagagtgtctacatgtacctgaagagacacgtgcgtgagaaggta
agaggggcatctggtggagctttacccaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgactatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagat
acgtgggaaaatgaattgccagtgtccaaatatgcaaataacctcacccagttagacaac
ggagtcagaattcctccaagtggttggaagtgtgccaggtgtgacctgcgagaaaacctc
tggttgaatctgaccgacggctctgtgctgtgtgggaagtggttctttgacagctccggg
ggcaacgggcatgcgctggagcattacagagacctgggctaccctctagctgtgaaactg
ggaaccatcactcctgacggggcagatgtttattctttccaagaagaggaacctgttttg
gatccccatttggccaagcacttagcgcattttggaattgatatgcttcatatgcatggg
acagagaatgggctccaggacaatgatagcaagccgcggatcagcgagtgggaggtgatc
caggagacggggacgaagctgaagcccatgtacggccccggatacacgggtctcaagaac
ctgggcaacagttgctatctcagctctgtgatgcaggccatcttcagcatcccagaattc
cagagagcatatgtaggaaatcttccaagaatatttgactactctcctttagatccaaca
caagatttcaacacacagatgactaagttaggacacggccttctctcaggccagtattca
aaacctcccatgaaatccgagctcattgaacaggtgatgaaggaggagcccaagcctcaa
cagaatgggatctcaccacgcatgtttaaggcctttgtgagcaggagccacccggaattc
tcctctaacagacagcaggatgcccaggaatttttcttgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagaacgt
attcagtgctgtcagacccgaaaagtccgctacacggagagggtggattacctgatgcag
ttacctgtggccatggaggcggcaaccaacaaggatgaactgatcgcctatgaactaacg
agaagggaagcagaagcaaacagaagaccccttcccgagctggttcgtgccaagatacca
tttagcgcctgccttcaggccttttctgaaccagaaaacgttgatgatttctggagcagc
gccctacaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctattgatatgccagacctacttgatatcaaccatctccgagccagggggttacag
ccaggagaggaggaacttccggacatcagcccccccgtaattattcctgatgactcaaaa
gatcgcctgatgaaccagttgatagacccatcagacatcgatgagtcatcggtgatgcag
ctggctgagatgggtttccctctggaagcgtgtcggaaggctgtgtattttactggaaat
atgggagccgaagtggccttcaactggatcattgttcacatggaagagccagattttgcc
gagccgctgaccatgccgggttatggaggagtagcttctgctggagcctctgctggactg
gataaccaacctccggaggaaactgtagctctcattacctccatgggattccatcgaaat
caggctcttcaggcgctacgagcaacgaatagtaacctggaaagagcactggattggatc
tttagccaccctgagttcgaggaggacagtgactttgtgatcgagatggagaataacgcc
aacgcgaacattatttctgaagccaagcctgaaggacctagagtcaaggatggatctgga
atgtatgaattatttgcgttcatcagtcacatggggacatctacaatgagtggacactac
gtttgtcacatcaaaaaggaaggaagatgggtgatctacaatgaccacaaagtttgtgcc
tcagaaaggccccctaaagacctgggctacatgtatttttaccgcaggataccaagctaa
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