Lipotes vexillifer (Yangtze River dolphin): 103080251
Help
Entry
103080251 CDS
T03090
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103080251 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lve04054
]
103080251 (DHX58)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103080251 (DHX58)
Pattern recognition receptors [BR:
lve04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103080251 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Terminase_6N
BBP1_C
Motif
Other DBs
NCBI-GeneID:
103080251
NCBI-ProteinID:
XP_007447228
UniProt:
A0A340WCF1
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYLAKRHLETVDGAKVVVLVNRVHLV
TQHREEFSNMLGKRWTITTLSGDMGPRAGFGHVARRHDLLICTAELLQKALTSLEEGEHV
ELNAFSLLVVDECHHTHKDTIYNVILSRYLELKLRRTRPLPQVLGLTASPGTGGASTLDG
AIDHVLQLCANLDTWRIMSPQDYRSQLQHSHQPCKQYDLCHRRTQDPFGDMLKELMDQIH
DHLEMPELRRDFGTQTYEQQVVELSREAAEAGLQERRVYALHLRRYNDALLIHDTVRAVD
ALATLQDFYDRERTTKTRILRAERWLLALFDDHKNKLAHLATRGPENPKLEVLEEILQQQ
FRSPDSLRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQLLIGAGNSSQSAQMIQMTQR
DQQEVIQKFRTGALNLLVATSVAEEGLDIPQCKVVVRYGLLTNEISMVQARGRARASQSV
YSFVAAQGSRELKRELTNEALETLMERAVAAVQEMDRAKYQDKIQDLQRAALVKRTAQAA
QRESHQHKFLAEHVRLLCVNCTVPVGYGSDLRRVEGTHHVNVNPNFSIYCNVSQEPVVIN
RVFKDWRPGGVISCRNCGEGWGLQMIYKSVKLPVLKVRSLLLETPQGRVQSKKWSRVPFT
VPDFDYVQHCAQSLADFSLD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcatttggctgcccacgggctctgggaagaccagggcagctgcttatttggccaagagg
catctagagactgtagacggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcatcgtgaggagttcagcaacatgctgggcaaacgctggaccattacaaccctg
agtggggacatggggccacgagctggctttggccatgtggcccggaggcacgacctgctc
atctgcacggctgagctgctgcagaaggcactgaccagcctggaggagggggagcatgtg
gagctcaacgccttctccttgttggtggtggatgagtgtcaccacacgcacaaagacacc
atctacaacgtcatcctgagccggtacctggagcttaaactccggaggacccggccgctg
ccgcaggtgctgggtctcacagcctcaccaggcactggcggggcctccacgctcgatggg
gccattgaccacgtcctgcagctctgtgccaacctggacacgtggcgcattatgtcaccc
caggactaccgctcccagctgcagcacagccaccagccctgcaaacagtacgacctctgc
catagacgcacccaggatccgtttggcgacatgctgaaggagctcatggaccaaatccac
gaccatctggagatgccggagttgagacgggacttcgggacgcagacctacgagcaacaa
gtggtggagctgagccgggaggcggctgaggcggggctccaggagcggcgggtgtacgcg
cttcacctgcgtcgctacaacgacgcactgctcatccacgacacggtccgtgcggtggac
gccctggccactctgcaggatttctacgacagggagcgcaccactaagacccggatcctg
cgtgccgagcgctggctgctggcgctgtttgatgaccacaagaataagctggcccacctg
gcaactcgtggcccagagaacccgaaactggaggtgctggaagagatcctgcagcagcag
ttcaggagccctgacagcctccggggcatcatcttcacccggacccgccagagtgctcac
tccctcctgctctggctccagcagcagccaggcctgcagacagtggacatcaggccccag
ctgttgattggggctgggaacagcagccagagcgctcagatgatccagatgactcagagg
gaccagcaagaagtgatccagaagttccggactggtgccctgaacctcctggtggctacg
agtgtggcagaggaggggctggacatcccccagtgcaaggtggtggtgcgctatgggctc
ctgaccaatgagatctccatggtccaggcaaggggccgtgcccgggccagccaaagtgta
tactcatttgtggcggcccaaggtagtcgggagctgaagcgggagctgaccaatgaggcg
ctggagactctgatggaacgggcagtggctgctgtgcaggagatggaccgggccaagtac
caggacaagatccaggatctgcagcgggcagccttggtcaagcggacagcccaggcggcc
cagcgggagagtcaccagcacaagttcctggcagagcacgtgcggctcctctgtgtcaac
tgcacggtgcccgtgggctatgggagtgacctacggagggtggagggtacccaccacgtc
aacgtgaaccccaacttctcgatctactgcaacgtctcccaggagcctgtggtcatcaac
agagtcttcaaggactggaggcctgggggtgtcattagctgcaggaactgtggggagggc
tggggtctgcagatgatctacaagtcagtgaagctgccagtactcaaagtccgcagcttg
ctgctggagacaccgcaagggcgggtccagtccaagaagtggtcccgcgtgcccttcacc
gtgcctgactttgactacgtgcagcactgtgcccagagcctggcagacttctccctggac
tga
DBGET
integrated database retrieval system