Lipotes vexillifer (Yangtze River dolphin): 103080332
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Entry
103080332 CDS
T03090
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103080332 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103080332 (TRIM71)
04121 Ubiquitin system [BR:
lve04121
]
103080332 (TRIM71)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103080332 (TRIM71)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103080332 (TRIM71)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103080332 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
103080332
NCBI-ProteinID:
XP_007464986
UniProt:
A0A340XUD2
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MASFSETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGAPGAAARRLHVLP
CLHAFCRSCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAAAGAGGHSNHRHHAHHAHPRASASAPPPLPPAPQPPAPPRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPTAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPI
CRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKA
KVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISA
VQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGF
VSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFG
AEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFG
SEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPA
GVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVS
DTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPD
CQSARFLGSEGTANGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSG
FGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttctccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcggggcccccggggctgcggcgcgccgcctacacgtcctgccc
tgcctgcacgctttctgccgctcgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgccgggagagccgctcaagctgcgctgccctgtgtgcgaccagaaggtcgtgctg
gccgaggcggcgggtatggacgcgctgccctcgtccgccttcctgctcagtaacttgctc
gacgccgtggtggccacggctgacgagccgccgcccaagaacgggcgggccggcgccgcg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgct
tctgcctcggcgccgccgccactcccgccagcgccgcagccgcccgcgccgccccgctca
gcgcccggcggccccgcggcctccccgtcggcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgcctcgactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgccttaccaaggaccactacatcgag
cgcggcccgcctggccccacagccgccgccgccgccgcggcgcagcagctcgggctcggg
ccgcccttccccggcgcgcccttctccatcctctcggtcttccccgagcgcctcggcttc
tgccagcaccacgacgacgaggtgctgcacctgtactgtgacacgtgctcagttcccatc
tgccgagagtgtactgtgggccggcatggcggccacagcttcgtctacctccaggaggcg
ctgcaggactcacgggcgctcaccatccagctgctggctgatgcccagcagggccgccaa
gccatccagctgagcattgagcaggcccagacggtggcagagcaggtggagatgaaggca
aaagtggtacagtcggaggtcaaagccgtgactgcgagacacaagaaggccctggaggaa
cgggagtgtgagctgctgtggaaggtagagaaaatccgccaggtgaaagccaagtccctg
tacctgcaggtggagaagctgcggcaaaacctcaacaagctggagagcaccatcagcgcc
gtgcagcaggtcctggaggaggggcgggcgctggacatcctgctggcccgagaccgcatg
ctggcgcaggtgcaggagctcaagactgtgcgcagcctcctgcagccccaggaggacgac
cgggtcatgttcacaccccctgaccaggccctctacctcgccatcaagtctttcggcttt
gtcagcagcggggccttcgcgccgctcaccaaggccacgggtgacggcctcaagcgggcc
ctccagggcaaggtggcctccttcactgtcatcggctacgaccatgacggggagccccgc
ctctcaggaggcgacctcatgtcggccgtggtcctgggccctgatggcaacctgtttggt
gcggaggtgagcgaccagcagaacgggacatacgtcgtgagctaccggccacagctggag
ggtgagcacctggtatcggtcaccctgtgcaaccagcacatcgagaacagccccttcaag
gtggtggtcaagtctggccgcagctacgtgggcatcgggctcccgggcctgagcttcggc
agtgagggcgacagcgatggcaagctgtgccggccctggggcgtgagtgtggacaaggag
ggctacatcgtggtcgctgaccgcagcaacaatcgcatccaggtgttcaagccctgcggc
gcctttcaccacaagttcggcactctgggctcccggcccgggcagttcgaccggcctgcc
ggcgtagcctgtgacacctcccgcaggatcgtggtggccgacaaggacaatcatcgcatc
cagatcttcacctttgagggccagttcctcctcaagttcggtgagaagggcaccaaaaac
gggcaatttaactacccttgggatgtggcggtgaattccgagggcaagatcctggtctcc
gacacgcggaaccaccggatccagctgttcgggcccgatggggtcttcctgaataagtat
ggcttcgagggggctctctggaagcactttgactccccgaggggggtggctttcaaccac
gagggccacttggtggtcaccgacttcaacaaccaccggctcctggtcattcacccggac
tgccagtcggcccgcttcctgggctcagagggcaccgccaatgggcaattcctgcgccca
cagggcgtggccgtggaccaggaggggcgcatcatcgtggccgattccaggaaccaccgg
gtgcagatgttcgagtccaacggcagcttcctgtgcaagtttggcgcccagggcagtggc
tttgggcagatggaccggccctccggcatcgctgtcacgccggatgggatgattgtcgtg
gtggactttggcaacaatcgaatcctcatcttctaa
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integrated database retrieval system
