Lipotes vexillifer (Yangtze River dolphin): 103082004
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Entry
103082004 CDS
T03090
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03013
Nucleocytoplasmic transport
lve05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103082004 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103082004 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103082004 (POM121C)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103082004 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
TT_ORF1
Motif
Other DBs
NCBI-GeneID:
103082004
NCBI-ProteinID:
XP_007468854
UniProt:
A0A340YAI4
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MSPAASAAGGGDRRRPLASVRDGRGRGWGCGGPAGAALLVLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRGSRAFSLVRNVRRQRTLLASPPAKSAVNGNLLEPRSLLEGPDPA
ELLLLGSYLGKPGPPQPAPAPESRDLRERPGRRPPARTAPPAQSAHPRGVQVHPFLPAPL
LRSSRRPSQRDCGTLSHRFVITPRRRYPIQQTQYSLLGVLPTVCWNGHHKKTVLSARNSK
MVCSPVTVRIAPPDSKLTRSPIREQIINSTLSSPSASAPDPCAKETVLNALRERKKRTVE
EEDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHSN
KRSRTSSMSSLTSTYTGGIPSSSRNAIASSYSSTRGLSQLWKRSGPGSSPFSSPASSRSQ
TPERPAKKIREEEPSHHSSSSTPLVTDKESQGEKVADKTTWKKQNSWNSPSTPGSSGQRK
RKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKVLEDKTDTASNSVTEN
PPTSQSSFTFTLPAAGTASSPTSLPAPSTNPLLESLKKMQNSPGLPSLPEAAGVAATVAH
SPPKTPSPLAPLGSSESAPLPGTSEDSKSTPTFLGLTPAASPGPVTDAKSPPDPQAETSA
KSQAPSAPSPSPKQSILFGMLSTPPVTPPASVAPAVSSASPMFKPIFVVPPKSENEGPLP
SSPSKVTAAASSSSAVPTTTSSPPLTFKPIFSNMGPPASVPMLTPFSFKQTATPATSTSA
PLLSGQAGATSAVVSMTTASTSADSAPKPAFSFGVRTATSTPSSVTSTTASASQPFLFGT
PPASGASFTPAVGPIFQFGKPPAMPASTAVATFGQSLPSAAQTTPSSSSSSSTASFSGFG
STLTASAPVSSSQPTLTFSSATAPAFNIPFGSSAKPPPPSYPGANPQPAFGAADGQQQGA
AKSALVPSFGSSFTFGNSAAPAPTAAPAPAPAPAQPAFGGTAQSAFSGLKATASAFGTPA
STQPAFGGTTAAFSFGAATTTGFGATTQTASSGTSSSVFGSTTPSPFTFGGPAAPAGSGG
FGISAATPGTSSASGAFGFGAGQSGTTGSTTLFGGGLSQNSLGAPSQSTPFAFNVASTPD
SKPVFGGTSTPTFGQNTPAPGVGASGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGS
KTPGARQRLQARRQHTRKK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggcttcggcggctggaggaggcgaccgacggcggccgttagcgagtgtc
agggacggccggggccggggctggggctgcggcgggccggccggggcggcgcttctcgtc
ctgtcgctgctcggcctcgtgctgtacctggtgccggcggcggctgcgctggcctggctg
gctgtgggggctaccgcggcctggtggggactgagccgcgagccccggggttcgcgcgcc
ttctcgctggttcggaacgtcaggcgtcagcgaacactgctcgcctcgcctccggccaag
tcggcagtaaacggaaatcttttagagccgcggagcctgctggaaggacccgaccccgca
gaactgctcctcttgggcagttacctgggcaagccaggccccccgcagcctgcccctgcc
ccggagagcagggacctgcgggagaggccgggccgacgcccacccgcccgcaccgcgccg
cccgctcagtcggcgcatccccgtggcgttcaagttcaccccttcctccccgctcctctc
ctccgatcctctaggaggccttcccagcgggattgtgggactttatcacatcggtttgta
ataacacctcgaagaagatatccaattcaacagacccaatattccttgctgggggtactt
cccacagtatgctggaatggtcatcacaagaagactgtgctatctgctcgtaattccaaa
atggtgtgcagcccagtgacagtgaggattgctcctccagatagcaaattgactcgttct
ccgatacgagagcaaattatcaactcaacactgtcctcaccatcagctagtgccccagac
ccatgtgcaaaggagacagtactgaatgccctcagagagaggaagaaaaggacagtggag
gaggaagaccaaatatttgctgatggccaggaaaataaaagaaggcgccatgatagcagt
gggagcggacattcagcatttgagcccctggtggccaacggagtccctgcttcttttgtg
cctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgatcactcgaat
aagagatcccgcacctcttctatgagctccttgacaagcacatacacaggtggcatccct
agctccagccgcaatgccattgccagttcttacagttccactcgaggtctctctcagctg
tggaagaggagtggacccggttcatctcccttctctagcccagcctcatcccgctcccag
acaccagagcggccagcaaagaaaataagagaagaggagccttctcatcattctagttct
tcaactccattggtaacagacaaggagtcccagggagaaaaggttgcagataaaaccacg
tggaagaaacagaactcgtggaattccccatcaacacctggcagctctgggcagcgtaaa
cggaaggttcagttgctgccctccaggcgaggggaccagctgaccttgcctccacctccc
cagcttggttattcaatcactgctgaagacttagacttggaaaagaaagcttctttacag
tggtttaacaaggtcttggaggataagactgatactgcctcaaactctgtcactgagaac
ccacctaccagtcagtcttctttcacttttacactgcctgctgctgggactgcttcatcc
ccaacctcgctcccagccccaagcactaacccactgttggagagcttgaagaagatgcag
aattccccaggcctaccatccctccccgaagctgctggcgtggcagccactgtggcccat
tcgcctccgaagacacccagccctctggcccctctgggctcttcagagtcagcacccctt
ccaggcacctccgaagactccaaatccacccccactttcttggggctgacccctgctgct
tccccaggaccagtcactgacgccaagtcacctccggaccctcaggctgagacatctgcc
aaatcgcaagccccgtccgccccgtctcccagccccaagcagagtattctgtttggaatg
ctgagcaccccacctgttacccctcctgcctctgtggcccctgctgtgtcttcagcatct
cccatgttcaagcccatttttgtggtcccacctaaaagtgagaatgagggccccttgccc
tctagcccttccaaggtcacagccgccgcatcttccagctcagccgtccccacgacgacc
agcagcccacccctcactttcaagcctatctttagcaacatggggccacctgcatctgtg
cccatgttaactcccttctccttcaagcaaacagctactccagccacttccacaagcgcc
cctctcctcagcggccaggctggcgccacctctgcagtggtgtccatgaccacagccagc
acctccgcagactctgctccgaagcccgcgttcagcttcggtgtgcgcaccgcgaccagc
accccgagcagcgtgactagcaccaccgcttccgcctcccagcccttcctctttgggact
ccccctgcttccggtgccagctttaccccagctgtgggccccatattccaatttggcaaa
cctcccgccatgcctgcttcaacagcagtcgccacctttggccagtcccttcccagtgcc
gcccagaccacccccagcagcagcagcagcagcagcacagccagctttagtggctttggc
agcaccctcaccgcctcagccccagtcagcagcagccagcccacgctgacgttcagtagc
gccaccgccccggcgttcaacattcccttcggctcgagcgccaagccacctcccccgtcc
tacccaggagccaacccccagcccgccttcggggctgcggatgggcagcagcagggggct
gccaagtcggccctcgtccccagcttcggcagctctttcacttttggaaactctgcagcc
ccggccccgactgcggctccagcgccagccccagccccggcccagccagcctttggtggc
accgcgcagtcggctttcagtggtctgaaggccacggcctctgcctttggcactcctgcc
agcacccagccagcctttggcggcaccacagctgccttctccttcggtgcagccaccacc
actggctttggagctacaacgcagaccgccagcagtgggaccagtagctcagtgttcggc
agcacgacaccatcgcccttcacatttgggggaccagcagccccagccggcagcgggggc
tttgggatcagtgcggccaccccaggcaccagctctgcctctggagcgttcggctttgga
gcaggacagagtgggaccactggcagcacgacccttttcgggggaggcttgagtcagaac
agcttgggcgcgcccagccagagcacaccgtttgccttcaacgtggccagcacgccggac
agcaaacctgtgtttggaggcacctccacacccacctttggtcagaacacccctgctcct
ggggtgggcgcatcaggcagcagcctctcctttggggcatcctcaacacccgcccaaggc
tttgtcggagttggacctttcggatcggcggccccctccttttccattggtgcgggatcc
aagaccccaggggctcgacagcgactgcaggcccgaaggcagcacacacgcaagaaatag
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