KEGG   Limimaricola variabilis: T8T21_15410
Entry
T8T21_15410       CDS       T09625                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
lvr  Limimaricola variabilis
Pathway
lvr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    T8T21_15410 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lvr03400]
    T8T21_15410 (uvrB)
DNA repair and recombination proteins [BR:lvr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     T8T21_15410 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      T8T21_15410 (uvrB)
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 AAA_22 UB2H AAA_16 AAA eIF3_p135 Kinesin
Other DBs
NCBI-ProteinID: WPY94472
LinkDB
Position
complement(3086073..3088286)
AA seq 737 aa
MHNNSPEQMPILHAPAPEVKRREKLEGGKRFRMQTEFKAAGDQPTAIEELAGGVRAGERD
QVLLGATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYD
YYQPEAYVPRSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTVDLHKGKNYEQRAVMADLVAQQYRRNDAAFARGAFRVRGDSLEVWPAHLEDRAWRL
SFFGDELESITEFDPLTGSKTDEFDRIRIYANSHYVTPRPTMAQAIKGIKAELKTRLDQL
QGEGKLLEAQRLEQRTHFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAI
VFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVSA
TPSAWELEQAGGVFTEQVIRPTGLLDPMIEIRPVKTQVDDLLDEIRKVTARGYRTLCTTL
TKRMAEDLTEYLHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERAMAETERRREK
QIAYNEEHGITPATVKKNVEDILAGLYKGDVDMNRVTAKVDKPMAGANLQAVLDGLKTDM
RKAAENLEFEEAARLRDEIKRLETVDLMVSDDPMARQQAIAQASDAASRSQGRSTAGRPG
QRGGNVQRTKNRKPRAS
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgcacaacaactcgcccgaacagatgccgatcctgcacgcgcccgccccggaggtgaaa
cggcgcgaaaagctcgagggcggcaagcggttccgcatgcagaccgagttcaaggccgcc
ggcgaccagcccaccgcgatcgaggagctcgcgggcggcgtgcgcgccggcgagcgggac
caggtgctgctcggcgccaccggcaccggcaagaccttcaccatggccaagatcatcgag
gagacgcagcgcccggcgatcatcctcgccccgaacaagacgctggcagcccagctctac
ggcgagttcaaggggttctttccggacaacgcggtcgagtatttcgtctcctactacgat
tactaccagcccgaggcctacgtgccgcgttcggataccttcatcgagaaggaaagccag
atcaacgaacagatcgaccggatgcgccactccgccacccgcgcgctgcttgaacgcgac
gacgtgatcatcgtggcatcggtgtcgtgcatctacggcatcggcagcgtcgagacctac
ggcgcgatgacggtcgacctgcacaagggcaagaattacgagcagcgcgcggtgatggcc
gatctggtggcgcagcaataccgccgcaacgacgcggccttcgcgcgcggcgccttccgg
gtgcgcggcgacagcctcgaagtctggcccgcccacctcgaggatcgggcctggcggctg
tccttcttcggcgacgagctggagagcatcaccgagttcgatccgctcaccggctccaag
accgacgagttcgaccgcatccggatctacgccaacagccactacgtcacgccgcgcccg
accatggcgcaggcgatcaagggcatcaaggcggagctcaagacccggctcgaccagctg
cagggcgagggcaagctcctggaggcgcagcggctcgagcagcgcacccatttcgacctc
gagatgctcgaggctaccggcgtgtgcaacggcatcgagaactactcgcgctacctgacc
ggccgcgcgcccggtgagccgccccccaccctgttcgagttcatccccgacaacgccatc
gtcttcgccgacgagagccacgtctcggtgccgcagatcggcggcatgtatcgcggcgac
taccggcgcaagttcacgctggccgagcatggcttccgcctgccctcctgcatggacaac
cgcccgctcaagttcgaggagtgggacgcgatgcgcccacagtcgatcttcgtctcggcc
acgccctcggcgtgggagctggaacaggcgggcggcgtcttcaccgagcaggtgatccgc
cccaccggcctgctcgacccgatgatcgagatccggccggtcaagacgcaggtcgacgac
ctgctcgacgagatccgcaaggtgacggcgcgcggctaccggacgctgtgcaccacgctg
accaagcgcatggccgaggacctgaccgagtacctgcacgagcagggcatcaaggtgcgc
tacatgcattccgacatcgacacgatcgagcggatcgagatcctgcgcgacctgcggctt
ggcgccttcgacgtgctgatcgggatcaacctgctgcgcgaggggctcgacatccccgaa
tgcggtctggtggcgatcctcgacgccgacaaggagggcttcctgcggtccgagacctcg
ctcatccagaccatcgggcgggccgcgcgcaacgccgacggccgggtcatcatgtatgcc
gaccggatcaccggctccatggagcgggcgatggccgagaccgagcgccgccgcgagaag
cagatcgcctataacgaggagcacggcattaccccggcgaccgtcaagaagaacgtcgag
gacatcctcgccggtctctacaagggcgatgtcgacatgaaccgggtcaccgccaaggtc
gacaagccgatggccggcgcgaacctgcaggcggtgctcgacgggctcaagaccgacatg
cgcaaggccgccgagaacctcgaattcgaggaagcggcgcggctgcgcgacgagatcaag
cggctcgagacggtcgatctgatggtgtcggacgaccccatggcacggcagcaggcgatc
gcccaggcctccgacgcggcgagccggtcgcagggccgctccaccgccggtcggcccggt
cagcgtggtggcaacgtgcagcgcaccaagaaccgcaagccgcgcgcctcttga

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