Limimaricola variabilis: T8T21_15410
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Entry
T8T21_15410 CDS
T09625
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lvr
Limimaricola variabilis
Pathway
lvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T8T21_15410 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_15410 (uvrB)
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8T21_15410 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T8T21_15410 (uvrB)
BRITE hierarchy
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
UB2H
AAA_16
AAA
eIF3_p135
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WPY94472
LinkDB
All DBs
Position
complement(3086073..3088286)
Genome browser
AA seq
737 aa
AA seq
DB search
MHNNSPEQMPILHAPAPEVKRREKLEGGKRFRMQTEFKAAGDQPTAIEELAGGVRAGERD
QVLLGATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYD
YYQPEAYVPRSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTVDLHKGKNYEQRAVMADLVAQQYRRNDAAFARGAFRVRGDSLEVWPAHLEDRAWRL
SFFGDELESITEFDPLTGSKTDEFDRIRIYANSHYVTPRPTMAQAIKGIKAELKTRLDQL
QGEGKLLEAQRLEQRTHFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAI
VFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVSA
TPSAWELEQAGGVFTEQVIRPTGLLDPMIEIRPVKTQVDDLLDEIRKVTARGYRTLCTTL
TKRMAEDLTEYLHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERAMAETERRREK
QIAYNEEHGITPATVKKNVEDILAGLYKGDVDMNRVTAKVDKPMAGANLQAVLDGLKTDM
RKAAENLEFEEAARLRDEIKRLETVDLMVSDDPMARQQAIAQASDAASRSQGRSTAGRPG
QRGGNVQRTKNRKPRAS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaactcgcccgaacagatgccgatcctgcacgcgcccgccccggaggtgaaa
cggcgcgaaaagctcgagggcggcaagcggttccgcatgcagaccgagttcaaggccgcc
ggcgaccagcccaccgcgatcgaggagctcgcgggcggcgtgcgcgccggcgagcgggac
caggtgctgctcggcgccaccggcaccggcaagaccttcaccatggccaagatcatcgag
gagacgcagcgcccggcgatcatcctcgccccgaacaagacgctggcagcccagctctac
ggcgagttcaaggggttctttccggacaacgcggtcgagtatttcgtctcctactacgat
tactaccagcccgaggcctacgtgccgcgttcggataccttcatcgagaaggaaagccag
atcaacgaacagatcgaccggatgcgccactccgccacccgcgcgctgcttgaacgcgac
gacgtgatcatcgtggcatcggtgtcgtgcatctacggcatcggcagcgtcgagacctac
ggcgcgatgacggtcgacctgcacaagggcaagaattacgagcagcgcgcggtgatggcc
gatctggtggcgcagcaataccgccgcaacgacgcggccttcgcgcgcggcgccttccgg
gtgcgcggcgacagcctcgaagtctggcccgcccacctcgaggatcgggcctggcggctg
tccttcttcggcgacgagctggagagcatcaccgagttcgatccgctcaccggctccaag
accgacgagttcgaccgcatccggatctacgccaacagccactacgtcacgccgcgcccg
accatggcgcaggcgatcaagggcatcaaggcggagctcaagacccggctcgaccagctg
cagggcgagggcaagctcctggaggcgcagcggctcgagcagcgcacccatttcgacctc
gagatgctcgaggctaccggcgtgtgcaacggcatcgagaactactcgcgctacctgacc
ggccgcgcgcccggtgagccgccccccaccctgttcgagttcatccccgacaacgccatc
gtcttcgccgacgagagccacgtctcggtgccgcagatcggcggcatgtatcgcggcgac
taccggcgcaagttcacgctggccgagcatggcttccgcctgccctcctgcatggacaac
cgcccgctcaagttcgaggagtgggacgcgatgcgcccacagtcgatcttcgtctcggcc
acgccctcggcgtgggagctggaacaggcgggcggcgtcttcaccgagcaggtgatccgc
cccaccggcctgctcgacccgatgatcgagatccggccggtcaagacgcaggtcgacgac
ctgctcgacgagatccgcaaggtgacggcgcgcggctaccggacgctgtgcaccacgctg
accaagcgcatggccgaggacctgaccgagtacctgcacgagcagggcatcaaggtgcgc
tacatgcattccgacatcgacacgatcgagcggatcgagatcctgcgcgacctgcggctt
ggcgccttcgacgtgctgatcgggatcaacctgctgcgcgaggggctcgacatccccgaa
tgcggtctggtggcgatcctcgacgccgacaaggagggcttcctgcggtccgagacctcg
ctcatccagaccatcgggcgggccgcgcgcaacgccgacggccgggtcatcatgtatgcc
gaccggatcaccggctccatggagcgggcgatggccgagaccgagcgccgccgcgagaag
cagatcgcctataacgaggagcacggcattaccccggcgaccgtcaagaagaacgtcgag
gacatcctcgccggtctctacaagggcgatgtcgacatgaaccgggtcaccgccaaggtc
gacaagccgatggccggcgcgaacctgcaggcggtgctcgacgggctcaagaccgacatg
cgcaaggccgccgagaacctcgaattcgaggaagcggcgcggctgcgcgacgagatcaag
cggctcgagacggtcgatctgatggtgtcggacgaccccatggcacggcagcaggcgatc
gcccaggcctccgacgcggcgagccggtcgcagggccgctccaccgccggtcggcccggt
cagcgtggtggcaacgtgcagcgcaccaagaaccgcaagccgcgcgcctcttga
DBGET
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