Leptonychotes weddellii (Weddell seal): 102727727
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Entry
102727727 CDS
T08708
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102727727 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lww04030
]
102727727 (RHO)
G protein-coupled receptors [BR:
lww04030
]
Rhodopsin family
Vision
Opsin
102727727 (RHO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srx
TAS2R
7tm_4
Motif
Other DBs
NCBI-GeneID:
102727727
NCBI-ProteinID:
XP_006740298
UniProt:
A0A2U3Y9M5
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MNGTEGPNFYVPFSNKTGVVRSPFEFPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFIFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVALTWVMALACAAPPLAGWSRYIP
EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMTVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVVAFLICWVPYASVAFYIFTHQGSNFGPTFMTLPAFFAKSAAI
YNPVIYIMMNKQFRNCMITTLCCGKNPLGDDEVSASASKTESSQVAPA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggacagagggcccgaacttctacgtgcccttctccaacaagacaggggtggtg
cgcagccccttcgagttcccacagtactacctggctgagccatggcagttctccatgctg
gccgcctacatgttcctgctgattgtgctcggcttccccatcaacttcctcacgctctac
gtcaccgtccagcacaagaagctacgcacgccgctcaactacatcctgctcaacctggcc
gtggccgacctcttcatggtcttcgggggcttcaccaccaccctctacacctcgctgcac
ggatactttatctttgggcccacgggatgcaatctggagggcttctttgccacgctgggc
ggtgaaattgccctgtggtctttggtggtcctggccattgagcggtatgtggtggtgtgt
aagcccatgagcaacttccgcttcggggagaaccatgccatcatgggcgtcgccctcacc
tgggtcatggcactggcctgtgctgcaccccccctcgctggctggtccaggtacatccca
gagggcttgcagtgctcgtgcgggattgactactacacgctcaagccagaggtcaacaac
gagtccttcgtcatctacatgttcgtggtccacttcaccatccccatgactgtcatattc
ttctgctatgggcagctcgtcttcacagtcaaggaggcggctgcccagcagcaggagtca
gccaccacccagaaggctgagaaggaggtcacacgcatggtcatcatcatggtcgtcgct
ttcctgatctgttgggtgccctacgccagtgtcgcattctacatcttcacccaccagggc
tccaactttggccccaccttcatgaccctcccggcgttcttcgccaagtctgccgccatc
tacaaccccgtcatctatatcatgatgaacaagcagttccggaactgcatgatcactacc
ctctgctgtggcaagaacccactgggtgatgatgaggtctctgccagtgcctccaagacg
gagagcagccaggtggcaccagcctaa
DBGET
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