Leptonychotes weddellii (Weddell seal): 102730834
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Entry
102730834 CDS
T08708
Symbol
VPS13D
Name
(RefSeq) vacuolar protein sorting-associated protein 13D
Organism
lww
Leptonychotes weddellii (Weddell seal)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
UBA
phi29_gp9_C
Piwi
Motif
Other DBs
NCBI-GeneID:
102730834
NCBI-ProteinID:
XP_030881268
UniProt:
A0A7F8QM29
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MGQGEVVLAKHVYEQVLQTLDNLVYSEDLNKFPVSATSSPCPNSPLPSLSTSGEPSIERK
ENGLFSHSSLSNSSQKSLSLKEVKSFTQIQANFCISELQVQLSGDLTLGAQGLVSLKFQD
FEVEFSKDHPQTLSIQIALRSLLMEDLLEKNPDSKYKNLMVSRGAPKPSSLAQKEYLSQS
CPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDQDCPLTPPPSPTVD
EPKILAGKSKFDDSLVHINVLLVDKKHPEFSSSYNRVNRNIDVDFNCLDVLITLQTWVVI
LDFFGIGSTADNHAMKVLPEDVLQNVKSESDALPESELQDPVNTKLDLKVHSLSLVLNKT
TSELAKASVSKLVAHLEMIDGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQT
FKYGRPDPLLRREHDIRVSLQMASVQYVHTQRFQAEVVAFVQHFTQLQDVLGRQRAAIEG
QTVGRPISVFSCRLGNEHDTALSIVDPVQIQVELVGNSSYQNSSGLMDAFNSEDFPPILE
IQLQALDIRLSYNDVQLFLAIAKSIPEQANAAAPDPVALETSSISSYLSGTSRAGEEIRE
GTRHTLDPVLELQLARLQELGFSMDDCRKALLVCQGQLKKAASWLFKNAEPLKSLSLASS
GRESQGPVVARLISGVEVKAESVCICFIDDCMDCDVPLAELTFSRLTFLQQARASPEGYA
HFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVL
IDQYVSTKESWMADYCKQEKEIDSTTSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNL
EHQIYARAEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGLVPEGNG
TFLDDAHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVD
KVGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV
RSALIVKNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVF
FCKAPIHWTNVVKTAEVSSSKRECHSMDLDKSRFFRFCVAIKKENYPDYMPSNIFSDSAK
QIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEVALHTADTSQNIELGV
SLENFPLCKELLIPPGTQNYMVRMRLYDINRRQLNLTIRIVCRAEGSLKIFISAPYWLIN
KTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMP
GWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNK
SSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG
GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPVV
FTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSELNCNMNDFQDNRQLY
YENFIYIAATYTFSGLQEGTGRPVASSKTTACAELVLDVSPKTQRVILKKKEPGKRSQLW
RMTGTGMLAHEGSSVPHNPNKPSAARSPEGSVILDIAGLAAVTDNRYEPLMLRKPDRRRS
TTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQFINQK
LRPGSGMLSIRVIPDGPTRALQITDFSQRKSDRSSYEVDELPVTEQEVQKLKNPDTEQEL
EVLVKLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDNQLIGTT
QPFMLYVTPLSNENEVIETGPAMQVNAVKFPSKSALTNIYKHLMITAQRFTVQIEEKLLL
KLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSVFTSNKLPL
DLKVS
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggagaggtggtgttagcaaagcatgtgtatgagcaggttttacaaacgctg
gacaatctcgtgtatagtgaagatctgaataagtttccagtcagtgctacctcctcacct
tgccctaattctcctctgccttccctcagtaccagtggagaaccttccattgaaaggaag
gagaatgggttgttcagccactccagcctttctaactcttctcaaaagtccttgtctctg
aaggaagtgaaatcttttacccagattcaagccaacttttgtatatcagagcttcaagtc
cagctaagtggagatctgactttgggggcccagggtcttgtgagcttaaagtttcaggat
tttgaggtggaattcagtaaagaccatcctcagactttatctattcagattgccctgcgc
tctctgctgatggaagacttactggagaaaaatccggattccaaatataagaacctgatg
gtgtctcggggagcccctaagccatctagtttagcacaaaaagagtatctttctcagtct
tgtccttcggtatccaatgtggagtatcctgacatgcctcggtctctcccttcccacatg
gaagaagctcctaatgtcttccagctgtatcaaagacccacctcagcatcccggaagaag
caaaaggaagtccaagaccaggactgtcccttgaccccacccccttctccaacagtagat
gagccaaagatacttgctggaaagagtaaatttgatgattccttggtacatatcaacgta
ttgttggtggataagaaacatccagaattctcttccagttataaccgagttaaccggaac
attgatgttgattttaactgcttggatgtgctgatcacgctgcaaacctgggtcgtgatc
ctagatttttttggaattggctccactgcagacaaccacgcaatgaaggtactgcccgag
gacgttctacaaaacgtcaagtcagaatcagatgctctcccggagtctgaacttcaggat
ccagttaacaccaagctggacctcaaggttcattcgctctctcttgtgctgaataagacc
accagtgagcttgctaaagcaagtgtatccaaattagtggcacacctggaaatgattgac
ggagacctggccttacagggaagcattgggagcctgtccctgagtgacctcacagcccat
ggagaattctacagagagcggttcactacaagtggagaagaagcgctcatcttccagact
tttaaatacggccggcctgaccctctgctccggagagaacacgacatccgagtgagcctg
cagatggcctccgtgcagtatgtgcacacgcagcgctttcaggccgaggtggtggccttc
gtgcagcacttcactcagctgcaagatgtcttagggcgccagcgagcggcgatcgagggc
cagacggtaggaaggcccatttccgtgttttcgtgccgactagggaatgagcacgataca
gctctttcaattgttgatccagttcaaattcaagtggagctggtggggaattcttcttac
cagaatagttcaggattgatggatgcattcaatagtgaagatttcccaccgatcttagag
attcagttacaagccctggatatcagactctcctacaatgatgttcagctgtttcttgcc
attgcaaaatccatcccagagcaagctaacgctgcagcgccggacccagtggccttggag
accagctccattagcagttacctttccggcacgtctcgggctggagaggagatcagagaa
gggacaagacataccctagatcctgtcttggagttacagctggctagactgcaggagctt
ggattcagcatggatgattgtcgcaaagcccttttggtgtgccaaggccaactgaaaaag
gcagcaagttggttgtttaagaatgccgaacctctgaagtctctttccctggcttcaagt
ggccgcgagagccaggggcccgtggtggcgcggctaatctctggagtggaggtgaaagcc
gagagcgtgtgcatctgcttcatcgacgactgcatggactgtgacgtccctctggctgag
ctcaccttttcccgtctgacttttctgcagcaagcaagagctagccctgaagggtacgcc
cacttcaccctctccggagattattacaaccgcgctctgtcaggctgggagccatttatt
gagccatggccatgctctgtatcttggcaacagcaggcagctagtcgtctccatcctcct
cgactgaagctggaagccaaggccaaaccccgtttggatatcaacatcacctctgtgcta
attgaccagtatgtaagtaccaaggaatcgtggatggcagattactgtaagcaggaaaag
gagatagattcaaccacatcagaagactggatgggctcttcagtggatcctccatgcttt
ggacaaagcctcccccttgtctaccttagaactaggagtacagccagtctgactaaccta
gagcaccagatctatgctagagcagaggtgaagacccccaagcgccggcagccgtttgtc
ccttttgctctgaggaaccacacaggctgcactttgtggtttgccaccctgaccaccacg
cccaccagggctgcgctgtcccacagtgggagtccagggctcgttccagaaggcaatggc
acatttcttgatgatgctcacaatgttagtgaatggcgggaagtcctcaccggggaagag
attccctttgaatttgaagcaagaggaaagcttagacacagacacacccacgacctccgg
attcatcagctgcaagtgagagtaaatggctgggagcaagtgagccccgtgtccgtggac
aaagttgggacatttttccgctatgcggcaccggataagaattcatcttcctctacgatt
ggcagccccagcagtagaacgaatattattcatccccaggtttatttctcttcgctccca
cctgtccgggtggtctttgccgtgacgatggaaggcagcgctaggaaagtaatcactgtc
cggtctgccctcattgtgaagaacaggcttgagacaccaatggagctaagactggatagc
ccatcagctccagacaagcctgtggtgcttcccgctatcatgccaggggattcgttcgct
gtgcctttacatctcacttcttggcggctacaggcccggcccaaaggattgggtgtattt
ttctgtaaggctcctattcactggaccaatgtagtgaagactgcagaggttagcagcagc
aaacgagagtgccactctatggacttggacaaaagccgattcttcaggttttgtgtggcc
ataaagaaggagaattacccggattatatgccctcaaacatattttctgatagtgcaaaa
cagatcttcagacaacctggacataccatatacctcctgccaactgtggtcatctgcaac
ttgctaccttgtgaacttgacttttatgttaaagggatgccaattaatgggaccctgaaa
cccggcaaagaggtggccctccacacagctgatacatcgcagaacattgaactgggggta
tcactggagaattttccactctgtaaagaattgctcattccacctggaacccaaaactac
atggtaagaatgcgactgtatgacatcaaccggcggcagctgaacctcaccatccggatt
gtgtgtcgagcagaaggatccttaaagatcttcatttctgctccatattggttgattaac
aaaacagggttaccactgatcttcagacaggacaatgcaaagacagatgctgcaggccag
tttgaggaacatgagctggcccggagcctgagccctctcttattctgctacgctgacaaa
gagcagccaaacctctgcacgatgagaatcggaagggggattcatcctgaaggcatgccg
ggctggtgtcagggcttctcgctggatggtggtagtggtgtacgagctttgaaagtcatc
cagcaaggaaaccgcccagggctgatctataacattgggattgatgtcaagaaaggccga
ggtcgatatattgacacctgtatggtcatctttgcccctcgttacctgttagataataaa
tcatctcacaagcttgcatttgcacagagggaatttgcccggggacagggaacagccaat
cctgaaggttacatttccacccttcctggttccagtgtggtgttccattggcctcggaat
gactatgatcagctcttatgtgtcagattgatggatgttcccaactgtatttggtctgga
ggctttgaagtcaacaagaataattccttccatatcaacatgagagataccctggggaag
tgcttcttcctgcgcgtggaaatcactctccgaggagctacctacaggatctcgttcagt
gacacggaccagttaccccctcctttccgaattgacaacttttctaaggttccggtggtc
tttactcagcacggtgtagctgaacccaggctccgaaccgaagtgaagcccatgacttca
ttggattacgcctgggatgaacccaccctgcctcctttcatcacgctgaccgtgaagggg
gcgggctcctcggagctcaactgcaacatgaatgatttccaggataaccgacagctttat
tatgaaaacttcatttacattgctgctacgtatacattctcgggtttacaggaggggacg
ggaaggcctgtggcctccagcaagaccactgcctgtgcagagcttgtcttggatgtctca
ccaaagacacaaagagtcattttaaagaagaaggagcccgggaagcgctcccagctgtgg
aggatgaccggcacgggcatgttggcccacgagggatcttcggtgcctcacaaccccaat
aagccctctgcggcccgctccccggagggctccgtcatcttggatatcgctggtctcgct
gcagtaactgacaacagatatgagccactgatgctgagaaagccagatcgcaggcgaagc
acaactcagacatggagtttccgggaaggaaaactgacctgcggcctgcacgggttggtt
gtccaggccaaaggagggctttctggtttgtttgatggagctgaagttgttcttggtcct
gatacttccatggagcttctggggccagttccacctgaacaacagtttatcaaccaaaaa
ctgaggcctggttctggaatgttatccatcagagtcatcccagacggaccaactagagca
ctccagataacagatttctcccaacggaaaagtgaccgttcatcatatgaagtggatgaa
cttcctgttactgaacaagaggtacagaaattaaagaatccagacacagagcaggaattg
gaagtgcttgtgaagttagaaggtggaattgggttgtccttaattaataaagtcccagaa
gaactggtctttgcaagtcttacaggaatcaatgtgcattatacgcagttggcaacaagt
catatgcttgagctcagcatacaggatgtgcaggtggacaatcagctcattggtaccacg
cagcccttcatgctctatgtgactcccctgagcaatgagaatgaggtcatcgagaccggc
ccagccatgcaggtgaatgcggtgaagttccccagtaagagcgcgctgaccaacatctac
aagcatctgatgatcacggctcagagattcacagtgcaaattgaggagaaactgctcctc
aagctgctgagtttttttggctacgatcaagcagaatcagaggtggaaaaatatgatgaa
aacctccatgaaaagacggctgagcaaggtggaacaccaattcgctactactttgaaaat
ctcaaaatcagcattccccagatcaagctgagtgtgttcacctccaacaagctaccattg
gatcttaaggtgagctga
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integrated database retrieval system
