Leptonychotes weddellii (Weddell seal): 102733692
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Entry
102733692 CDS
T08708
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102733692 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102733692 (LIG4)
Enzymes [BR:
lww01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102733692 (LIG4)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102733692 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102733692
NCBI-ProteinID:
XP_006740915
UniProt:
A0A2U3YB17
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTPTGPHG
DAGDFATIAYFVLKPRCLQKGSLTVQQVNDILDSIASNNSARRKDLIKKSVLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKQGDAYQYFSRNGFNYTD
QFGDSPREGSLTPFIHSAFKTDIQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILTSVFTPVPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAIAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKSPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVSSDMYKAGCTLRFPRIEKIREDKEWHECTTLDDLE
QLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSSAQTPGEMASVIANLEYRYSWDRSPLSMFRHHIIYLDLYAVINDLSTKIEGTRLAV
TALELRFHGAKVVSRLAQGVSHVIIGEDQSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENLYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcacagacttcacaaactgttgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgaatacagagaagtaaaggacgtgctgaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacgatgctcttcataagaaccaaaaagatgtc
agggactccttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctacggaatcaaagaaactatgcttgctaaactttatatcgaattgcttaatttacct
aaagacggaaaagacgcccttaaacttttaaattatagaacgcccaccgggcctcatgga
gatgctggagactttgcaacaattgcatattttgtgttgaaaccaagatgcttgcagaaa
ggaagtttaaccgtacagcaggtaaatgacattttagactcaattgccagcaataattct
gccaggagaaaggacctaataaagaagagtgttcttcagctaataagtcagagttcagcg
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagtgag
cagtctgtattttctgttttccataatgatgctgccgaattgcataatgtcaccacagat
ctggaaaaagtctgtaggcaactgcatgatccttccataggactcagtgatatttccatc
actttattctctgcctttaaaccaatgctggctgctatagcagatattgagcgcatcgag
aaggacatgaaacaccagagtttctacattgaaaccaagctagacggcgagcgtatgcag
atgcacaaacagggggatgcgtatcagtacttctcccgaaatggttttaactatacagat
cagttcggcgattctccccgggaaggttctctcacaccgttcattcacagtgcattcaaa
acagacatacaaatctgtatcctggatggagagatgatggccttcaaccctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgatctg
cagacttgttattgtgtgtttgatgtactgatggttaataataaaaagctagggcatgaa
accctgaaaaagaggtatgaaattctcactagtgtttttacaccagtaccaggtagaata
gaaatagtgcaaaaaacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gccatagataaaagggaagagggaatcatgataaaacagcctctgtctatttacaagcca
gacaaaagaggcgaaggatggttgaaaattaaaccagagtatgtggacgggctgatggat
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttgtgtgctatagcagagaagcctcctcctggtgaaaaaccgtcagtgttt
catactctgtgtcgtgttggttcgggttataccatgaaagagctgtacgatctgggtttg
aaattggcccaacattggaagccttttcataaaaaatctccaccaagcagcattttgtgt
ggaacagagaagcctgaggtgtacatcgagccttgtcattctgtcattgttcaagttaag
gccacagagatcgtctccagcgatatgtacaaagctggctgcacattgcgttttccacga
atcgagaagataagagaagacaaagagtggcacgaatgcaccaccctggatgacttagaa
cagcttcgtgggaaagcatcgggaaagcttgcgtccaaacacctttacataggtggcgat
gatgaaccacaggaaaagaagaggaaagctgccccgaaggtgaagaaagttattggaatt
atcgagcacttaaaagcacccaacctttctaatgtaaacaaagtttctaatgtatttgaa
gatgtggagttttgtgtcatgagtggaacagacagccatccgaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacatactgcgtg
attgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccttggcagcct
cgctttatgattcatatgtgcccatcaacaaaggaacattttgcccgtgaatatgactgt
tatggtgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcagga
attaaaaattccagcgcacaaactcctggagaaatggcttctgtgattgctaatttagag
tatcggtattcctgggaccgttcccctctcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttattaatgacttgagtaccaaaatcgagggaacgagattagctgtt
acagctctggagcttcgatttcatggagccaaagtagtttctcgtttagctcagggagtg
tctcatgtaatcattggggaggatcagagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgagttgcaggaggaaaatctatatttggtttaa
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