Lysobacter yananisis: RDV84_23815
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Entry
RDV84_23815 CDS
T09342
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
lya
Lysobacter yananisis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
WMT02953
UniProt:
A0AA51SFN1
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All DBs
Position
complement(5775124..5779950)
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AA seq
1608 aa
AA seq
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MSRRKNFARLSPSRHPLMAVLAVAVGTALSASVQAQEAGKVWTSDWLPPDPQTTEEGIQN
KIKEVIASYPDSAGIEMQVTGHFVTLNKTISKYETVPKPPVINPWVYSDFSTPNPPPGVG
SVEALELQIAQRYNQESTTEGCPNVSVIHVSPVWNEVTPWDDGQTMTQGFGTYTGTRSAW
TGGQCEIVNVSGSTTKLRDVACPNDGVLGWSDEKHGCVFPIVFTYQSETLAKNECPVGNP
CDPTTGDKSEPAPDFDLGWIAFDRHYHSMASVARSGFGSGWTHSHNIQLAMGVDPMDPNQ
TLNVGLIEADGSQLAFKAAGSAYEAVDGSGDRLVADGTDWLLYRADRVLRFNVDNRLTEQ
KLEDGTSLSYSYDTARRLTTITHSTGRSLVLEYNGVSEDATIAAVRSAGTALATYSYTAG
GQVETVTYADAKTRTYHYEDTRFPRLLTGVTGEDNQRYSTFTYDAKARVTSSSHAGGADA
VTLTYPSAGGSTVTDALGAVTTYGMTTWVQDGPTRKISKFSDPVRGDIERTYLDASVDFR
RRLSTVKDRRGFETHHSYSEANDTVTGQPARMHSVKEAAGQVVERNTQARTDIASNRTIL
TVVGNREIRITRNARLQPATVAVRDTTTNEVRTTSYVYCEAADVSAANSACPTLGLLKSV
NGPRTDVNDITTFQYFGSDDSTCAATPALCTYRKGDLRKTVDALGRATEVLGYDSQGRPL
SVLDANGVVTDYEYTPRGWLTATKVRGANNAVETDDRITRIEHEPTGLVKKVTLPNGVFT
TYTYDAAQRLTDVTDNEGNKIHYTLDLAGNRKQEDAKTASGTLRRTLSRVFNTLGQLETL
KDAGQNPTGFHYDVNGNQDQVMDALSRATTQSYDPLNRLSVTVQDVGGVGAESKVEYNAF
DQVVKVTDPKNLITLYAYNGFGDRTKLTSPDTGVTDLTYNAAGQVATKKDANDAVAHRYT
YDALGRPKAVFYTTTGPADVEFDYDTANTECTTGQTFATGRLTATRTEANELKYCYDRFG
QVVRKVQIVSGKSFTLSYAYTLAGDLDSITYPDGTTVDYVRDTQARIKEVGVRPSGGTRT
VLLNNATYEPFGPVTGWAYGNGRTLSRSYDLDYRPKTILDSASGGLSLGYGYNTVGDLTE
LKDGLHATFKAKYDYDTLGRLTVTNDHNSNPLDTYTYDKTGNRTSLTDGGGLQAYDYNAT
GSHRLTAVAGVVRGYDAAGNTTSIGGSAKEFVYSANDRLSQFKQAGVVKASYRYNSRGER
VATTGATTTTIDTYTLYDEAGNWIGDYDTTGAPKQQAIWFGDAPVGLVVGAGAGQTLAYV
QPDHLGTPRSIIDPARNVAVWAWDAKSEVFGNSPPNQDPDQDGVAFVFNMRFPGQRLDAA
SGLVYNYFRDYDSATGRYIQSDPIGLSGGASTFGYAGGNPQRFTDIYGLASVDNWENKQV
HKIQPPPRAPGDWLGPAVGVGIVAILAPVAVEAIPFVPLFINPATLSNVGVFTAEVAGVS
GAGRYLSRNLTGAVAPAVQRYWFEISRGDKRASATQVDLYMQCSTFRRLMIEDGWSWAPS
SALQGAGKLTKGGYTYNIYPVSKSTGAPSAKLVTADGYRVANVRFNPE
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaggaagaatttcgcacgcctatcgccgagccgccatcctctgatggccgtg
ctggcggtggccgtgggcacagcgttgagcgccagcgttcaagcccaagaggccggaaag
gtctggacgtccgactggcttccgcccgatccgcaaaccacggaagaaggcatccagaac
aagatcaaggaggtcattgcgagttaccccgacagcgccggcatcgaaatgcaggtcacc
ggacactttgtgaccctgaacaagacgatctcgaagtatgagaccgtgccgaagccgccg
gtgatcaatccttgggtctacagcgacttcagcacgcccaaccctccgcccggggtgggt
tctgtggaggcgttggaacttcagattgcccagcgctacaaccaagagagcaccaccgaa
ggttgtccgaacgtcagcgtgatccatgtttctccggtttggaatgaggtcacgccgtgg
gatgacggtcagacgatgacccaaggatttggcacctacacgggcacgcgctcggcatgg
accggaggccagtgcgagatcgtcaatgtctctggatccacaacaaaactgcgcgacgtg
gcgtgccccaacgacggcgttctgggctggagtgacgagaaacacggatgtgtgtttccg
atcgtgttcacctatcaatcggaaacactcgccaagaatgagtgtccggtgggcaacccg
tgcgatcccaccaccggcgacaagtctgagcctgcgcccgactttgatctcggctggatc
gctttcgaccgccactaccattccatggcctcagtggcgcgcagcggttttggcagtggc
tggacgcactcgcacaacatccagctggccatgggggttgaccccatggatcccaatcaa
acgctcaatgtgggcctgatcgaagccgacggttcgcagctcgcgttcaaggcagctggt
tcggcgtatgaggcagtggacggcagtggcgatcggttggtcgctgatggcacagattgg
ctgctgtatcgagccgatcgggtgctgcgcttcaatgtggacaaccgcctgaccgagcag
aagcttgaggatggcacaagcctgagctacagctacgacacggcccgccgtctgacgacc
atcacccacagcaccggtcgcagcttggtgctggaatacaacggtgtcagcgaagacgcc
accattgccgcggtccgctcggcaggaacggcactcgcgacctacagctacaccgccggc
ggccaagtcgaaacggtcacctacgcggacgcaaaaacgcgcacctaccactacgaagac
acccgtttcccgcggttgttgaccggggtgacgggcgaggacaatcagcgctacagcacg
ttcacctacgacgccaaggcccgcgtgacctcaagcagccacgcaggtggtgcggacgcc
gtgaccctgacctatccctccgccggcggctcaaccgtcaccgacgccttgggcgcagtg
accacctacggcatgacgacatgggtgcaggacggtccgacccgcaagatcagcaagttc
tccgatcctgtccgcggtgacatcgaacgcacctacttggacgcgtcggtggatttccgc
cgccgcctgagcacggtcaaggaccgccgcggattcgaaacccaccacagctacagcgag
gccaacgacaccgtgacggggcagcccgcgcgcatgcactctgtcaaggaagcggctggg
caggtggtggagcgcaacacgcaggcccgaacggacatcgccagcaatcggaccatcttg
acggtcgtcggcaaccgcgaaatccgcatcacccgcaatgcgcgtctgcagcccgcgacg
gttgctgtgcgcgacacgaccaccaacgaggtccgcacgacgagttatgtctactgcgag
gccgcggacgtgtcggcggcgaacagcgcctgtccgacgctgggcttgctgaagtcggtg
aatgggccgcgcaccgacgtcaacgacatcacgacgttccagtatttcggcagcgacgac
agcacctgtgcggcaacacctgccttgtgcacctatcgcaagggcgacctgcgcaagacc
gtcgacgcgctcggtcgggcgaccgaagtgctgggctacgactcgcagggtcgaccgctg
tccgtgctcgatgccaacggtgtggtgaccgactatgaatacaccccgcgtgggtggttg
acggccaccaaggtgcgtggtgccaacaacgcggtggagaccgacgatcggatcacccgc
atcgagcatgagccgaccggattggtgaagaaggtcaccttgcccaatggggtgttcacc
acctacacctacgatgcggctcagcgcttgaccgacgtaaccgataacgagggtaacaag
atccactacacgttggatctggcgggcaaccgcaagcaagaggatgccaagaccgccagc
ggcacgctgcgtcgcacgctgtcgcgggtgttcaataccttggggcagttggagacgctg
aaggatgctgggcagaaccccacgggcttccattacgacgtcaacggcaatcaggatcag
gtcatggacgcgttgtcgcgagccaccactcagtcctacgatccgctgaatcgattgagc
gtcacggtgcaggatgttggcggagtgggggccgaaagcaaagtcgaatacaacgcgttc
gatcaagtcgttaaggtcaccgacccgaaaaatctcatcacgctgtatgcctacaacggc
ttcggtgatcggaccaagttgaccagcccggacacgggcgtcaccgacctcacctacaac
gccgcaggccaagtggcgacgaagaaggatgccaacgacgcggtggcgcatcgctacacc
tacgatgcactcggccgccccaaggcggtcttctatacaacgacaggaccggccgatgtc
gaattcgactacgacacggccaacaccgaatgcaccacgggtcaaaccttcgccaccggg
cgcctgacggccacccggaccgaagccaatgaactgaaatactgctacgaccgctttggt
caggtcgtgcgcaaggtgcagatcgtttccggcaagagcttcaccttgagctatgcctac
acgctcgcaggtgatctcgacagcatcacctatcccgacggcacgaccgtggactatgtc
cgggatacccaagcgcggatcaaggaggtcggtgttcgccccagtggcggcacccgcacg
gtgctgctgaacaacgccacctacgagccctttgggccggtgaccgggtgggcttacggc
aatggccgtacgctcagccgctcctacgatctggactaccggcccaagaccattttggac
agtgcgagtggcgggctgtcgctgggctacggttacaacacggtgggtgatttgaccgag
ctgaaggacggtctgcacgccaccttcaaggcgaagtatgactacgacaccttggggcgg
ctgacggtcaccaacgaccacaacagcaacccgctggacacctacacctacgacaagacc
ggcaaccgcacgagcttgaccgatggtggtgggctgcaggcttacgactacaacgcgacc
ggcagccaccgattgacggcagttgccggtgttgtgcgtggctacgacgccgccggcaac
accaccagcatcggtggcagcgccaaggagttcgtctacagcgccaacgaccggctgagc
cagttcaagcaggcgggtgtggtcaaggccagctaccgctacaacagccgcggcgagcgc
gtggccaccacaggcgcgacgaccaccacgatcgacacctacacgctgtatgacgaggcc
ggcaactggatcggcgactatgacaccacgggtgcgccgaagcagcaggcgatttggttc
ggcgacgcccctgtgggcttggtggtgggggccggagccgggcagacgttggcttatgtc
cagccagatcatttgggcacgccgcggtcgatcattgaccccgcgcgcaatgtcgcggtg
tgggcatgggacgccaagagtgaggtgttcggcaacagtccaccgaatcaggatccggat
caggacggggtcgcgttcgtcttcaatatgcgctttccggggcagcggctggatgcggcc
agtgggttggtctataactactttcgtgactacgattctgctaccggtcgttatatccag
agcgacccgattgggcttagtggtggcgctagcacttttggatatgctggaggtaacccg
cagcgatttactgacatctacgggcttgccagtgtagacaactgggagaacaagcaagtc
cacaaaattcagccgccgccgcgtgcgcccggggattggctggggcctgcggtcggtgtc
ggaattgtggctattctcgcgcctgtcgctgtggaagccataccgtttgttccgctgttt
ataaatccggcgacgctgtcgaacgtcggtgtatttacagctgaagttgccggtgtcagt
ggtgcgggccgctatctctccaggaatttgacaggcgcggtcgctccggcagttcagaga
tattggtttgagatttcaagaggtgataagcgagcaagtgcgactcaagtagatctgtat
atgcaatgctcaacatttcgtaggttgatgatcgaagatggctggagttgggcgccatct
tcagcacttcagggggcggggaaactgactaagggtggatatacttacaacatatatcca
gtgtcaaaaagcacgggcgccccttccgcaaagcttgttactgctgatggttacagggtt
gccaacgttcgatttaatccggaatga
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