Lysinibacillus sp. CD3-6: FH508_0003125
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Entry
FH508_0003125 CDS
T08381
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lyc01002
]
FH508_0003125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lyc01011
]
FH508_0003125
Peptidases and inhibitors [BR:
lyc01002
]
Cysteine peptidases
Family C40
FH508_0003125
Peptidoglycan biosynthesis and degradation proteins [BR:
lyc01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
FH508_0003125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
OapA
DUF1175
LRAT
CHAP
Transglut_prok
BrkDBD
Ubiq-Cytc-red_N
Motif
Other DBs
NCBI-ProteinID:
UED80902
LinkDB
All DBs
Position
697024..697953
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AA seq
309 aa
AA seq
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MLKSQKWRILALSTIATSFFAIQTAEAATYTVQKGDTLSKIAQTHQVTIQDIKKWNNLSK
DTIYVAQKLEITKQATAETVKPSKPTTETVKPSKPTTTTPSKPSTAVHTVIKGDTLSKIA
KQYNVTLKELKDWNGIENDTIYIGQVLKISPVAVIPEGDTIHNNVTSDTGAPSKVTNQDP
TANGQAIYKKTVELANKLIGTPYLYGGNTPEGLDCSGFIFYAFNQGGLKIGRDSSEGYFN
NSTTQVKNPVPGDLVFFENTYKEGISHMGIYLGNNKFIHAGTDGVELSDVTYSYWSTRLV
AYKRFDTVK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatcacaaaaatggagaattctcgctttaagcactattgctacttcatttttt
gcaatacaaactgcagaagctgcaacatatacagtacaaaaaggcgatacgttatccaaa
atcgcccaaacccaccaagtgacaattcaagacataaaaaaatggaacaatttatcaaag
gatacgatttatgtagcccaaaaactagagattacaaagcaggcgacagctgaaacagta
aaaccgtcaaaacctacaacggaaacagttaaaccgtcaaagccaacaacaactacacct
tctaagccatcgactgccgttcatacagttattaaaggcgatacgctctcgaaaattgca
aagcaatacaatgtgacattaaaagagcttaaagattggaatggaatagagaacgacacg
atttatattggacaagtgttaaaaatttctccagtagccgtaatacccgagggtgataca
atacataacaatgtgacttcagatacgggggcaccatcaaaagtaacaaatcaagatccg
acagcgaatggacaggctatatacaaaaaaacggtggaactggctaataaactaattgga
acgccatatctttatggaggaaacacaccagaaggtcttgattgtagtggatttattttt
tacgctttcaatcaaggtggtttgaaaattggacgagatagcagcgaaggctatttcaat
aacagtacaacgcaagtgaaaaatcctgtgccaggagacttagtattttttgaaaatacg
tataaagaaggtatttctcatatgggtatttacctcggtaacaataaatttatccacgca
ggtacggatggtgtagaactttctgatgttacgtactcttactggtcaactagattagta
gcttataaacgattcgatacagtgaaataa
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