Protaetiibacter intestinalis: D7I47_08725
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Entry
D7I47_08725 CDS
T05661
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lyd
Protaetiibacter intestinalis
Pathway
lyd00521
Streptomycin biosynthesis
lyd00523
Polyketide sugar unit biosynthesis
lyd00541
O-Antigen nucleotide sugar biosynthesis
lyd01100
Metabolic pathways
lyd01110
Biosynthesis of secondary metabolites
lyd01250
Biosynthesis of nucleotide sugars
Module
lyd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D7I47_08725 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7I47_08725 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7I47_08725 (rfbC)
Enzymes [BR:
lyd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D7I47_08725 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AYF98330
UniProt:
A0A387BIG9
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Position
1842328..1842939
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AA seq
203 aa
AA seq
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MQIRELTIPDAYEITPKQFGDDRGVFLEWYRYDRLSEVVGHPLDLRQANLSSSRKGVVRG
IHFADVPRGQAKYVTAPRGAVIDFVVDIRVGSPTFGEWDTVLLDDVDRRAIYIAEGLGHA
FVALTDDAVVSYLVSDVYNPAAEHGISPIDPTIALRFPLDASELVLSEKDTSAPTLEAAA
AAGLLPDYSQVRAYYDALGGATR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatccgagagctcaccatcccggatgcctatgagatcaccccgaagcagttcggt
gacgaccgcggcgtgttcctcgagtggtaccgctacgaccgcctcagcgaggtcgtagga
catccactcgacctgcgtcaggcgaacctctcgtcgtctcgcaagggtgtcgtacgcggc
atccatttcgccgacgtgccccgggggcaggcgaagtatgtcacggccccccgcggggcg
gtgatcgacttcgtcgtcgacatccgtgtggggtcgcccaccttcggcgagtgggacacc
gtgctgctcgacgacgtcgaccgccgtgcgatctacatcgcggaggggctcggccacgct
ttcgttgcgctgaccgacgacgccgtggtcagctacctggtctccgacgtctacaacccc
gccgccgagcatggaatctcgccgatcgatccgactatcgcgctgcgcttcccactcgac
gcatcagaactcgtcctgtccgagaaggatacaagcgcacccaccctcgaggcggcggcc
gcggccggacttctccccgactactcgcaggtgcgcgcctactacgacgcactcggaggg
gcaacgcgatga
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