KEGG   Protaetiibacter intestinalis: D7I47_13525
Entry
D7I47_13525       CDS       T05661                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
lyd  Protaetiibacter intestinalis
Brite
KEGG Orthology (KO) [BR:lyd00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    D7I47_13525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lyd03021]
    D7I47_13525
Transcription machinery [BR:lyd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D7I47_13525
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 MFMR_assoc CDC27 Nop14
Other DBs
NCBI-ProteinID: AYF99173
UniProt: A0A387B9Y9
LinkDB
Position
complement(2867529..2868998)
AA seq 489 aa
MATPSTSAKDAVKDDSATPKKTAPKTAAAPAKTTAAKTTAAKAPAAKTAATKAPAPAKAT
AAKTTAAKTTAAKAPAAKAPAKAAPKGKAAPDTETDELETELDEDEPVALEEDDEESEDG
EGAAAESTEGKDDEENGDAEASEDDDEDDETESTGTDEPLPTGALRLSMADDEDEVPVYS
AAITGATADPVKDYLKQIGKVALLNAEQEVELAMRIEAGLFAEEKLSAMSDSEKRSQLGR
ELSWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTK
GFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEEL
SRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQKQ
LESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSR
SQSLRDYLE
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggccaccccctcgacgtccgcgaaggacgctgtcaaggacgacagcgccaccccgaag
aagacagccccgaagaccgccgccgcgccggcgaagacgacggccgccaagacgaccgcc
gccaaggctccggccgcgaagacggccgccaccaaggcgcccgcgcccgcgaaggcgacg
gctgccaagaccaccgcagccaagaccaccgccgcgaaggccccggccgccaaggcgccg
gcgaaggccgcccccaagggcaaggccgcgcccgacaccgagaccgacgagctcgagacc
gagctcgacgaggacgagcccgtcgccctcgaggaggacgacgaggagtcggaggacggc
gagggcgccgcggccgagtcgaccgagggcaaggacgacgaggagaacggcgacgccgag
gcgtccgaggacgacgacgaggacgacgagacggagtcgaccggcaccgacgagccgctc
ccgaccggtgcgctgcgcctgtcgatggcggacgacgaggacgaggtccccgtgtactcg
gccgccatcaccggcgcgaccgccgacccggtcaaggactacctcaagcagatcggcaag
gtcgccctcctcaacgcggagcaggaggtcgagctcgcgatgcgcatcgaggcgggcctc
ttcgccgaggagaagctctcggcgatgtccgactccgagaagcgcagccagctcggccgc
gagctcagctgggtcgcccgcgacggccagcgcgccaagagccacctgctcggcgccaac
ctgcgtctcgtcgtctcgctcgcgaagcgctacacgggccgcggcatgcagttcctggac
ctcatccaggagggcaacctcggcctcatccgtgccgtcgagaagttcgactacaccaag
ggcttcaagttctcgacctacgcgacatggtggatccgtcaggcgatcacgcgtgccatg
gccgaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctc
gcccgcgtgcagcgtcagatgctgcaggacctgggccgcgagcccacgcccgaggagctc
agccgcgagctcgacatgacccccgagaaggtcatcgaggtgcagaaatacggccgcgag
ccgatctcgctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctcatc
gaggacaccgaggcggtcgtgccggcggacgccgtgggcttcacgatgctgcagaagcag
ctcgagagcctgctcgactcgctcagcgagcgggaggcgggcgtcatccggatgcgcttc
ggcctcggcgacggcatgcccaagaccctcgaccagatcggcgacaccttcggcgtcacg
cgcgagcgcatccgccagatcgagtcgaagaccatggcgaagctgcgtcacccttcgcgg
tcgcagtcgctgcgcgactacctggagtaa

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