Protaetiibacter intestinalis: D7I47_13525
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Entry
D7I47_13525 CDS
T05661
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lyd
Protaetiibacter intestinalis
Brite
KEGG Orthology (KO) [BR:
lyd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D7I47_13525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyd03021
]
D7I47_13525
Transcription machinery [BR:
lyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D7I47_13525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
MFMR_assoc
CDC27
Nop14
Motif
Other DBs
NCBI-ProteinID:
AYF99173
UniProt:
A0A387B9Y9
LinkDB
All DBs
Position
complement(2867529..2868998)
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AA seq
489 aa
AA seq
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MATPSTSAKDAVKDDSATPKKTAPKTAAAPAKTTAAKTTAAKAPAAKTAATKAPAPAKAT
AAKTTAAKTTAAKAPAAKAPAKAAPKGKAAPDTETDELETELDEDEPVALEEDDEESEDG
EGAAAESTEGKDDEENGDAEASEDDDEDDETESTGTDEPLPTGALRLSMADDEDEVPVYS
AAITGATADPVKDYLKQIGKVALLNAEQEVELAMRIEAGLFAEEKLSAMSDSEKRSQLGR
ELSWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTK
GFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEEL
SRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQKQ
LESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSR
SQSLRDYLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccctcgacgtccgcgaaggacgctgtcaaggacgacagcgccaccccgaag
aagacagccccgaagaccgccgccgcgccggcgaagacgacggccgccaagacgaccgcc
gccaaggctccggccgcgaagacggccgccaccaaggcgcccgcgcccgcgaaggcgacg
gctgccaagaccaccgcagccaagaccaccgccgcgaaggccccggccgccaaggcgccg
gcgaaggccgcccccaagggcaaggccgcgcccgacaccgagaccgacgagctcgagacc
gagctcgacgaggacgagcccgtcgccctcgaggaggacgacgaggagtcggaggacggc
gagggcgccgcggccgagtcgaccgagggcaaggacgacgaggagaacggcgacgccgag
gcgtccgaggacgacgacgaggacgacgagacggagtcgaccggcaccgacgagccgctc
ccgaccggtgcgctgcgcctgtcgatggcggacgacgaggacgaggtccccgtgtactcg
gccgccatcaccggcgcgaccgccgacccggtcaaggactacctcaagcagatcggcaag
gtcgccctcctcaacgcggagcaggaggtcgagctcgcgatgcgcatcgaggcgggcctc
ttcgccgaggagaagctctcggcgatgtccgactccgagaagcgcagccagctcggccgc
gagctcagctgggtcgcccgcgacggccagcgcgccaagagccacctgctcggcgccaac
ctgcgtctcgtcgtctcgctcgcgaagcgctacacgggccgcggcatgcagttcctggac
ctcatccaggagggcaacctcggcctcatccgtgccgtcgagaagttcgactacaccaag
ggcttcaagttctcgacctacgcgacatggtggatccgtcaggcgatcacgcgtgccatg
gccgaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctc
gcccgcgtgcagcgtcagatgctgcaggacctgggccgcgagcccacgcccgaggagctc
agccgcgagctcgacatgacccccgagaaggtcatcgaggtgcagaaatacggccgcgag
ccgatctcgctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctcatc
gaggacaccgaggcggtcgtgccggcggacgccgtgggcttcacgatgctgcagaagcag
ctcgagagcctgctcgactcgctcagcgagcgggaggcgggcgtcatccggatgcgcttc
ggcctcggcgacggcatgcccaagaccctcgaccagatcggcgacaccttcggcgtcacg
cgcgagcgcatccgccagatcgagtcgaagaccatggcgaagctgcgtcacccttcgcgg
tcgcagtcgctgcgcgactacctggagtaa
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