Lysinibacillus sp. SGAir0095: C1N55_08685
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Entry
C1N55_08685 CDS
T06028
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lyg
Lysinibacillus sp. SGAir0095
Pathway
lyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N55_08685 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyg03400
]
C1N55_08685 (uvrA)
DNA repair and recombination proteins [BR:
lyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N55_08685 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1N55_08685 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
AAA_16
AAA_29
DnaJ_CXXCXGXG
nSTAND3
AAA_25
AAA_22
RsgA_GTPase
AAA_33
NACHT
NB-ARC
T2SSE
NTPase_1
Zn-ribbon_8
AAA_14
AAA_7
AAA_18
APS_kinase
nSTAND1
AAA_15
cobW
ATPase
Rad17
RNA_helicase
AAA_5
ATPase_2
Viral_helicase1
PhoH
AAA_23
AAA_28
Sigma54_activat
Guanylate_kin
Cytidylate_kin
AAA
DnaB_C
IstB_IS21
DZR
Roc
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
QCR32243
UniProt:
A0A4V1FFB7
LinkDB
All DBs
Position
1771972..1774434
Genome browser
AA seq
820 aa
AA seq
DB search
MKDMIEIYGAKENNLKNVSLMIPKQKLVVLTGPSGSGKSTLAMDILQRECQRQYMESMGM
PTEGMSKPNVERIIGLSPSIGVGQHVTNRNPRSTVGTVTDMYTYLRLIYEKLGERQCPNC
HELIPPTISQGETTEETGFKEYIYCPHCNERLEKLTRSHFSFNTLEGACDSCGGLGKVVE
INIDSLFQEDLSMEDGGVLHAHWQGTYGDYNKGIFKEATKHYGIPFDEKLPLKDYSAPLK
DLLLYGVEDEKFIVHFPDVKPPKTVGKGKFVGILAAMWRRYKEGSSSDADYFYTDTCPEC
EGKKLKKESREVFVSGRSITEVSSDSLDKIYGWLKQLASDIPQESSSLIETFLHDLTTKV
SRIIDVGLGYLSIDRQTITLSGGEAQRLRLASILGSGLTGVLYILDEPTAGLHPKDTKGL
VQIMKQLRDLGNTVLVIEHDVEVMREADYIIDMGPGAGSFGGQVVGEGSLESLIEQEASV
TGAFLRVEENAVFKRREGTGDTITIHNAYKHNLKNVTATFPLGCLISVSGVSGSGKSTLV
FDVLNSYDDGKIEGCDNITGFESISRVISVDQSPLSRMQRSNVATYTDIFTLVRNLYASL
PEAKSKGLKAKEFSFNTPGGRCENCQGLGFVTINMHFLPDLEVQCPVCHGKRFTEEILAV
KYKGYSISEILDLSIEESLEIFEDNKKIFPMIRLLIEIGLGYLKWGQSLTTLSGGEGQRL
KLSKELNKPTKDHTLYVLDEPSTGLHPRDIKQLLLLLNRLVDVGNTVIVVEHNSDIIRES
DWIIDLGPEGGNAGGVIIAQGTPEQIAAEKASYTGVYLNL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatgattgaaatctatggggccaaggagaataatttgaaaaatgtttctctg
atgattccaaagcaaaaactagttgttttaacaggaccatcaggctcaggtaagtcgacc
ttagcaatggatattttacaaagggaatgtcaaagacaatatatggaatctatggggatg
cctacagaggggatgagcaagccgaatgttgaaagaattattgggctttcaccttccata
ggtgtagggcagcatgtgacaaatcgaaatcctcgttctacagttggtacagttacggat
atgtacacgtatttacgacttatttatgaaaaattgggtgaacgacaatgtccaaattgt
cacgagcttattcctcctactatttctcaaggtgaaacaactgaagaaactgggttcaaa
gagtatatctattgtcctcattgcaatgagcgattagaaaaattaacgagatcacatttc
tcatttaatacgttagaaggagcatgtgattcttgtggaggtttaggaaaagtagttgaa
attaacatagactcactctttcaagaggacttaagcatggaagatggaggagttcttcat
gcacattggcaaggaacttatggggattataataagggtatcttcaaagaagctacaaag
cactatggaattccttttgatgaaaaactaccgttaaaggattattctgcaccattaaag
gatttactgttatatggtgttgaggatgaaaaattcattgtacactttccagacgtaaag
ccacctaaaacggtaggaaaagggaaatttgtaggcatattagctgccatgtggagaagg
tataaagaggggagttcttctgacgctgactatttctatacagatacttgtccagaatgc
gaagggaaaaagttgaaaaaagaaagtagagaagtgttcgtaagcggcagatccataaca
gaggtttcatccgattcattagacaagatatatggatggttaaaacaactggcatctgat
ataccacaagaaagtagtagcctaatagaaacatttctacatgatttaacaaccaaagta
tctcggattattgatgtgggtctaggttatttatccattgacagacaaacgattacgctt
tctggaggggaagcgcagcgtttaagattagcttccatcctaggatcaggattgactggc
gtattgtatatactagatgaaccaacagctggacttcatccaaaagatacgaaaggcttg
gttcaaattatgaagcaattaagagatttaggaaatacagtactcgtaatcgaacatgat
gtggaagtgatgcgagaagctgattacattatcgatatgggcccgggcgcaggaagtttt
ggtggacaagtagtgggtgaaggtagtttggagtctctaattgaacaagaagcttcggta
acgggtgcctttctaagagtagaagaaaatgccgttttcaaacgtagagagggcactggg
gatacgattacaattcacaatgcgtacaaacataatttgaaaaatgttacggcaacgttt
ccgcttggctgtctaatatctgtttcgggtgtttcaggttcagggaagtcaactttagta
tttgacgtactaaactcatatgatgatggaaaaattgaaggatgtgacaacataacgggt
tttgagtcaatttccagagtaatatccgtcgatcaatctcccctaagccgtatgcaacga
tcgaatgttgcaacctatacagatatctttacactagttcggaatttatatgctagtcta
ccagaagcaaagtcaaaagggttaaaagccaaagaattttcgttcaacacacctggtggt
cgatgtgaaaattgtcagggtttagggtttgtaacgattaacatgcattttttgcccgat
ctagaagtacaatgtccagtatgtcatggaaaaaggtttacagaagaaatattagcagtg
aagtataaaggatattctatttccgaaattttagatctttcaattgaagaaagtctagag
atttttgaggataataagaaaatatttccgatgattcgtttattaattgaaattggtcta
ggttatttaaaatggggacaatcgcttacaaccttatctggtggagaagggcaacgacta
aaattatcgaaggaattaaacaaaccgacaaaagaccataccttgtatgtattagatgag
ccatccacaggacttcacccaagagatattaaacagcttctattattgctgaatcgattg
gtcgatgtggggaacacagtgattgtcgttgaacataatagtgatattatacgtgaatct
gactggatcattgatcttggtccagaaggtggtaatgcaggaggggtaattatagcacaa
ggtacaccagaacagattgcagccgagaaagcttcttacactggagtatatttaaactta
taa
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