KEGG   Lysinibacillus sp. SGAir0095: C1N55_08685
Entry
C1N55_08685       CDS       T06028                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lyg  Lysinibacillus sp. SGAir0095
Pathway
lyg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C1N55_08685 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lyg03400]
    C1N55_08685 (uvrA)
DNA repair and recombination proteins [BR:lyg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1N55_08685 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C1N55_08685 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N AAA_16 AAA_29 DnaJ_CXXCXGXG nSTAND3 AAA_25 AAA_22 RsgA_GTPase AAA_33 NACHT NB-ARC T2SSE NTPase_1 Zn-ribbon_8 AAA_14 AAA_7 AAA_18 APS_kinase nSTAND1 AAA_15 cobW ATPase Rad17 RNA_helicase AAA_5 ATPase_2 Viral_helicase1 PhoH AAA_23 AAA_28 Sigma54_activat Guanylate_kin Cytidylate_kin AAA DnaB_C IstB_IS21 DZR Roc PPV_E1_C
Other DBs
NCBI-ProteinID: QCR32243
UniProt: A0A4V1FFB7
LinkDB
Position
1771972..1774434
AA seq 820 aa
MKDMIEIYGAKENNLKNVSLMIPKQKLVVLTGPSGSGKSTLAMDILQRECQRQYMESMGM
PTEGMSKPNVERIIGLSPSIGVGQHVTNRNPRSTVGTVTDMYTYLRLIYEKLGERQCPNC
HELIPPTISQGETTEETGFKEYIYCPHCNERLEKLTRSHFSFNTLEGACDSCGGLGKVVE
INIDSLFQEDLSMEDGGVLHAHWQGTYGDYNKGIFKEATKHYGIPFDEKLPLKDYSAPLK
DLLLYGVEDEKFIVHFPDVKPPKTVGKGKFVGILAAMWRRYKEGSSSDADYFYTDTCPEC
EGKKLKKESREVFVSGRSITEVSSDSLDKIYGWLKQLASDIPQESSSLIETFLHDLTTKV
SRIIDVGLGYLSIDRQTITLSGGEAQRLRLASILGSGLTGVLYILDEPTAGLHPKDTKGL
VQIMKQLRDLGNTVLVIEHDVEVMREADYIIDMGPGAGSFGGQVVGEGSLESLIEQEASV
TGAFLRVEENAVFKRREGTGDTITIHNAYKHNLKNVTATFPLGCLISVSGVSGSGKSTLV
FDVLNSYDDGKIEGCDNITGFESISRVISVDQSPLSRMQRSNVATYTDIFTLVRNLYASL
PEAKSKGLKAKEFSFNTPGGRCENCQGLGFVTINMHFLPDLEVQCPVCHGKRFTEEILAV
KYKGYSISEILDLSIEESLEIFEDNKKIFPMIRLLIEIGLGYLKWGQSLTTLSGGEGQRL
KLSKELNKPTKDHTLYVLDEPSTGLHPRDIKQLLLLLNRLVDVGNTVIVVEHNSDIIRES
DWIIDLGPEGGNAGGVIIAQGTPEQIAAEKASYTGVYLNL
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgaaggatatgattgaaatctatggggccaaggagaataatttgaaaaatgtttctctg
atgattccaaagcaaaaactagttgttttaacaggaccatcaggctcaggtaagtcgacc
ttagcaatggatattttacaaagggaatgtcaaagacaatatatggaatctatggggatg
cctacagaggggatgagcaagccgaatgttgaaagaattattgggctttcaccttccata
ggtgtagggcagcatgtgacaaatcgaaatcctcgttctacagttggtacagttacggat
atgtacacgtatttacgacttatttatgaaaaattgggtgaacgacaatgtccaaattgt
cacgagcttattcctcctactatttctcaaggtgaaacaactgaagaaactgggttcaaa
gagtatatctattgtcctcattgcaatgagcgattagaaaaattaacgagatcacatttc
tcatttaatacgttagaaggagcatgtgattcttgtggaggtttaggaaaagtagttgaa
attaacatagactcactctttcaagaggacttaagcatggaagatggaggagttcttcat
gcacattggcaaggaacttatggggattataataagggtatcttcaaagaagctacaaag
cactatggaattccttttgatgaaaaactaccgttaaaggattattctgcaccattaaag
gatttactgttatatggtgttgaggatgaaaaattcattgtacactttccagacgtaaag
ccacctaaaacggtaggaaaagggaaatttgtaggcatattagctgccatgtggagaagg
tataaagaggggagttcttctgacgctgactatttctatacagatacttgtccagaatgc
gaagggaaaaagttgaaaaaagaaagtagagaagtgttcgtaagcggcagatccataaca
gaggtttcatccgattcattagacaagatatatggatggttaaaacaactggcatctgat
ataccacaagaaagtagtagcctaatagaaacatttctacatgatttaacaaccaaagta
tctcggattattgatgtgggtctaggttatttatccattgacagacaaacgattacgctt
tctggaggggaagcgcagcgtttaagattagcttccatcctaggatcaggattgactggc
gtattgtatatactagatgaaccaacagctggacttcatccaaaagatacgaaaggcttg
gttcaaattatgaagcaattaagagatttaggaaatacagtactcgtaatcgaacatgat
gtggaagtgatgcgagaagctgattacattatcgatatgggcccgggcgcaggaagtttt
ggtggacaagtagtgggtgaaggtagtttggagtctctaattgaacaagaagcttcggta
acgggtgcctttctaagagtagaagaaaatgccgttttcaaacgtagagagggcactggg
gatacgattacaattcacaatgcgtacaaacataatttgaaaaatgttacggcaacgttt
ccgcttggctgtctaatatctgtttcgggtgtttcaggttcagggaagtcaactttagta
tttgacgtactaaactcatatgatgatggaaaaattgaaggatgtgacaacataacgggt
tttgagtcaatttccagagtaatatccgtcgatcaatctcccctaagccgtatgcaacga
tcgaatgttgcaacctatacagatatctttacactagttcggaatttatatgctagtcta
ccagaagcaaagtcaaaagggttaaaagccaaagaattttcgttcaacacacctggtggt
cgatgtgaaaattgtcagggtttagggtttgtaacgattaacatgcattttttgcccgat
ctagaagtacaatgtccagtatgtcatggaaaaaggtttacagaagaaatattagcagtg
aagtataaaggatattctatttccgaaattttagatctttcaattgaagaaagtctagag
atttttgaggataataagaaaatatttccgatgattcgtttattaattgaaattggtcta
ggttatttaaaatggggacaatcgcttacaaccttatctggtggagaagggcaacgacta
aaattatcgaaggaattaaacaaaccgacaaaagaccataccttgtatgtattagatgag
ccatccacaggacttcacccaagagatattaaacagcttctattattgctgaatcgattg
gtcgatgtggggaacacagtgattgtcgttgaacataatagtgatattatacgtgaatct
gactggatcattgatcttggtccagaaggtggtaatgcaggaggggtaattatagcacaa
ggtacaccagaacagattgcagccgagaaagcttcttacactggagtatatttaaactta
taa

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