Lysinibacillus sp. SGAir0095: C1N55_18160 Help Entry C1N55_18160       CDS       T06028                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism lyg  Lysinibacillus sp. SGAir0095 Pathway lyg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:lyg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     C1N55_18160 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lyg03400]     C1N55_18160 (ligD) Enzymes [BR:lyg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      C1N55_18160 (ligD) DNA repair and recombination proteins [BR:lyg03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      C1N55_18160 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M RNA_ligase DNA_ligase_A_C Motif Other DBs NCBI-ProteinID:  QCR33936 UniProt:  A0A4P8SAF1 LinkDB All DBs Position 3692170..3694020 Genome browser AA seq 616 aa AA seqDB search MKPMLLTSAETAPTGDDWIYEVKYDGFRCILKWDSDGITLISRNDKELTDYFPEIIHYCE NIVDRISPHFPLILDGEIVYLQNDYKSDFSTVQSRGRMRTKKTIVESSEKYPCNFIAFDL LQINGEDITQAALEKRKQKLLTLFKNVQLPLSPFYKNRGNLQLVAVFHDSNRLWDKIKEW NGEGLIAKKSSSLWESGKRSSLWLKVKNWRIVTIILTVFDQTNGYFNGAVFSGEELVEIT TFRHGLTDEEMQTLAKFFQTNGTKTSPTTWTLPPSICVDVACIDFDGKKLREPRFEAFRF DVPSSSATWKRMLRGLTPIPEKVEITHPDKPVWPAVGLEKDDYIYYLQEVAPFFLSFLKN RLLTSIRFPHGVPGESFYQKNAPDYTPSFINTSMEEDIEYIVCNDMRTLLWLGNQLVIEF HIPFKTIDTTCPTEIVFDLDPPSVDEFSLAIEAALYMKAIFDKFNLQSFIKTSGGKGLQI YIPLPRDRFTFDETRIFTEFVCRFLVEQNPKWFTIERMKKNRGNRLYLDYIQHAEGKTIV SPYSPRGNETGLIATPLEWHEVTSTLTPKKFTIPAVLDRIKKKGDLFNDFYKVGENQPFE AVLTTLKELMKKNKES NT seq 1851 nt NT seq  +upstreamnt  +downstreamnt atgaaaccgatgctcttaacatcagcagaaactgcaccaactggtgatgattggatatac gaagtaaaatatgatggttttcgatgtattttaaaatgggattcagatggcataacttta attagtcgaaatgataaagaattgaccgattacttccctgaaatcattcattactgcgaa aacatagtagatagaatttctccccatttccccctcattttagatggtgagattgtttat ttacagaatgactacaaaagtgatttttcaactgtgcaatccagaggaagaatgcgtact aaaaaaacgattgttgaatccagcgaaaagtacccttgtaactttatagcctttgattta cttcaaataaatggtgaagatattacacaagcagcacttgagaagcgaaaacaaaaactt ctcacattatttaaaaacgttcagttacccctttctcccttctacaagaatagaggaaat ctccaattagtggcggtgtttcatgatagtaatcgactatgggataaaataaaagaatgg aacggcgaagggctaatcgccaaaaaaagtagcagtctgtgggagagtggcaaaaggtca agtctgtggttaaaggtgaaaaattggcgcatcgtgacaattattctgactgttttcgat caaacaaatggttattttaatggtgcagttttttctggagaagaattggtagaaatcact acgttccgtcacgggcttacggatgaagagatgcaaacccttgcaaagttttttcaaacg aacggtacgaaaacctcccctacaacctggacacttcctccatccatttgtgttgatgta gcttgtattgatttcgatggaaaaaagcttcgcgaaccgcgctttgaagcattccggttt gacgttccctcatctagcgctacctggaaaaggatgttaagagggctaacgccaatacct gagaaagtagaaattactcaccctgataagcctgtttggccagcagtcggcttggagaag gatgattatatttactatcttcaggaagtggcacctttctttttatcatttttgaaaaat cgtctacttacatccatcaggtttcctcatggtgtgccgggtgaaagtttttatcagaaa aatgcacctgattatacgcctagctttatcaacacaagtatggaggaagatattgaatat atcgtatgcaatgatatgaggaccttattgtggttaggaaatcaactggtaatcgaattt catatcccctttaaaacaatcgatacaacatgtcctacagaaattgtatttgacttggat ccaccttcagtggatgaattttcattagctattgaagctgcgctatatatgaaagcgata tttgataaattcaatctacaatcctttatcaaaacctccgggggtaaaggtttgcaaatt tatatcccacttccaagagatcggtttacgtttgatgaaacaagaatttttacagagttt gtgtgccgctttttagtagaacaaaatccaaaatggtttaccatagaacgcatgaaaaaa aatcgaggaaaccgtttatatttagattacattcagcatgctgaaggaaaaacgattgtt agtccctattccccaagaggaaatgagactggcttaatagcaacccctttggaatggcat gaagtaacaagtactctgactcccaaaaaattcactatcccagctgttttggatcgcatt aaaaagaagggcgatttattcaatgatttctataaagtcggagaaaaccaaccctttgaa gctgtacttactacgttaaaggaactcatgaaaaaaaataaggagagctaa

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