Lysinibacter sp. HNR: FrondiHNR_05305
Help
Entry
FrondiHNR_05305 CDS
T09375
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00250
Alanine, aspartate and glutamate metabolism
lyh00410
beta-Alanine metabolism
lyh00430
Taurine and hypotaurine metabolism
lyh00650
Butanoate metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh02024
Quorum sensing
Module
lyh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FrondiHNR_05305
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FrondiHNR_05305
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FrondiHNR_05305
00430 Taurine and hypotaurine metabolism
FrondiHNR_05305
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FrondiHNR_05305
Enzymes [BR:
lyh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
FrondiHNR_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
DUF1523
Motif
Other DBs
NCBI-ProteinID:
WGD38328
LinkDB
All DBs
Position
complement(1201873..1203264)
Genome browser
AA seq
463 aa
AA seq
DB search
MSNTHKISHQDYVSVNPLFSRPGESSLASKFSLGEEGMLPETAYQIVHDETMLDGNARLN
LATFVGTWMDPQAEKLYAESFDKNMIDKDEYPQTAAIEHYGWRIIADLWNAPNPEKALGT
STIGSSEACMLGGLALKRRWQQARRQAGKSTEKPNLIMSSSVQVCWEKFCNYWDVEPRYV
PLSEEHRIFDGYNLAEYVDENTIGVVAILGVTYTGEYEPVLQIAQALDKIQQDTGLDIPI
HVDAASGGMIAPFLQPDLLWDFRIPRVHSINTSAHKYGLVYPGLGWVVWRDEELLPEDLV
FRVSYLGGDMPTFALNFSRPGAQVLLQFYLFLRLGREGYRAIQQASQDVALFLSKGISQN
PAFQLWSDGSDIPVFAWRLREGHTKNWSLYDLSDRLRSRGWLVPAYPMPDNLNNITVQRI
VVRNGMSMDLAVSLLNVINEEVAFLDQLSGPLPTRTTKPTFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacacacaagatcagtcatcaagattatgtttctgttaatccgctcttttca
cgtcccggagaaagctccctggcatctaaattctccctcggcgaggaggggatgctgccg
gaaaccgcctatcaaatcgtgcatgacgaaacaatgctcgatggcaacgcccgactcaac
ctagccactttcgtgggaacgtggatggatcctcaagcagaaaaactctacgcggaatcc
tttgacaagaacatgattgacaaggatgaatacccacaaaccgcagcaattgagcactat
ggctggcgcatcattgcagacctgtggaacgcacccaaccccgaaaaagcacttggtacc
tccactataggttcctccgaagcctgcatgctcggaggcctggcgctcaaacgccgctgg
caacaggcccgccgtcaggctggtaaatcgacagaaaaacccaacctcatcatgagttct
tctgttcaggtctgctgggaaaaattctgtaactactgggacgttgaaccccgctatgtt
ccactctccgaagaacaccgcatctttgacgggtacaacctggcagagtacgtagacgag
aacaccatcggagtcgtagcgatccttggcgtcacctataccggagaatacgagccggtg
cttcagattgcccaagcactggataaaatccagcaggataccggccttgatatccccatt
cacgtggacgccgcatccggcggtatgatcgcaccttttctccagcccgaccttctgtgg
gacttccgcatcccccgagtacactccatcaacacctcagcccataaatacggtctcgtc
tatccggggctggggtgggtcgtgtggcgcgacgaagagctcctgccggaagacctcgtt
tttagagtgagctacctgggtggagacatgcccacttttgccctcaacttttcccgtccg
ggagcccaggtacttctccagttctacctctttctacggctcggcagggagggatatcgg
gctatccagcaggcatcacaggatgttgcacttttcctctcaaaaggaatttcccaaaac
cccgcgtttcagctctggagcgatggctctgatatccctgtttttgcctggcgtctccga
gaagggcataccaagaactggagcctctatgacctttccgaccggcttcgatcccgtggg
tggctcgtccctgcctaccccatgcccgataacctcaacaacataacggtccaacgcata
gtggttagaaacgggatgagcatggacctcgcggtctccctcctgaacgtgatcaacgaa
gaggtggccttcctcgaccagctcagcggccccctacccaccaggacgaccaaaccaact
ttccatcactaa
DBGET
integrated database retrieval system