Protaetiibacter larvae: FLP23_09860
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Entry
FLP23_09860 CDS
T06178
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lyk
Protaetiibacter larvae
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FLP23_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyk03400
]
FLP23_09860
Enzymes [BR:
lyk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FLP23_09860
DNA repair and recombination proteins [BR:
lyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FLP23_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QEO10858
UniProt:
A0A5C1YBK8
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All DBs
Position
2090903..2091766
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AA seq
287 aa
AA seq
DB search
MRVDGREVHLTSLDKVMYPATGTTKGEVVDYYARIAGVLVPHARDRPATRKRWVAGVGTA
AAPGQVFFEKNLPASAPEWIARREIQHRDHVNVYPLVNDTATLVWAAQQNALELHVPQWR
FGRDGAPHNPDRFVLDLDPGEGAGLPECVAVAVLARELLGAQGLELLPVTSGSKGIHLYA
ALDGRRTSAEMADAAHEWARELEAAHPELVVSAQRKADRVGRVLVDWSQNTAAKTTVVPY
SLRGRLRPTVAAPRSWDELLAPGLRQLEFTEVLDRVDASGDPLASLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcgtcgatgggcgcgaggtgcacctgacctcgctcgacaaggtcatgtatccggcc
accggcaccacgaagggcgaggtggtcgactactacgcccgtatcgccggggtgctcgtc
ccgcacgcccgcgatcgcccggcgacgcgcaaacgctgggtggcgggggtgggcaccgct
gcggcgcccgggcaggtgttcttcgagaagaacctgccggcgtccgcgcccgagtggatc
gcccgccgcgagatccagcaccgggaccacgtgaacgtctacccgctcgtgaacgacacc
gcgacgctcgtgtgggcggcgcagcagaacgcgctcgagctgcatgtgccgcagtggcgc
ttcggccgcgacggcgcaccgcacaaccccgaccgtttcgtgctggatctggaccccggt
gagggcgcggggctgccggagtgcgtggcggtggcggtgctcgcgcgcgaactgctggga
gctcagggcctggagctgctgccggtgacgagcggcagcaagggcatccacctgtatgcc
gcgctcgatgggcggcgcacgagcgctgagatggcggatgccgcgcacgagtgggcgcgg
gagctggaggcggcgcatccggagctcgtggtgagcgcccagcgcaaggcggatcgggtg
ggccgggtgctcgtggactggagccagaacaccgcggccaagaccaccgtggtgccgtat
tcgctgcgcggacggctgcgccccacggtggcggcgccccgcagctgggatgagctgctc
gcgccggggctgcgccagctggagttcacggaggtgctggatcgggtggatgcctcggga
gaccccctggcatccctcgcctga
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