Lysinibacillus sp. YS11: LBYS11_17100
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Entry
LBYS11_17100 CDS
T05299
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00730
Thiamine metabolism
lys01100
Metabolic pathways
lys01240
Biosynthesis of cofactors
lys04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LBYS11_17100
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LBYS11_17100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lys03016
]
LBYS11_17100
Enzymes [BR:
lys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LBYS11_17100
Transfer RNA biogenesis [BR:
lys03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LBYS11_17100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
NAD_synthase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AUS87951
LinkDB
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Position
complement(3417031..3418239)
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AA seq
402 aa
AA seq
DB search
MIWKEILIRYGELSTKGRNKMDFIRRLRENIRHAFADLGQLHIRTERDRMFIAIEDEAQM
QMLITGLPKIFGIQSFSPVAACEKDMDSMKKLAITIMETFKDEPHTFKVEVKRTDKTFPL
ESHAIQREIGGYVLPQFQNLSVKVKQPDIELRVEVRHDATYMMAQVIPGAGGMPVGSNGK
SLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSQNSLEKVKVLANELTKFGASIRL
HVIPFTEIQVLIKEKVPSNVSMTTTRRMMLKVADQVREEIGALAIVTGESLGQVASQTLE
SLTAINAVTNTPILRPLISTDKLEIIDIAEKIGTYETSIQPFEDCCTIFTPASPKTKPKL
EKVEHYESFSDFDELIERAVKNREVYIFPKKEEQQDKFADLL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaaagaaattttaattagatatggtgagctttctacaaaaggtcgcaacaaa
atggattttatccgccgtttacgtgaaaatattcgtcatgcctttgcagatttaggacaa
ctgcatattcgcacagaacgtgaccgtatgtttattgccatagaagacgaagcacaaatg
caaatgctaattacaggtttacctaaaatttttggtattcaatcatttagccctgtcgct
gcatgcgaaaaagatatggacagtatgaaaaagctcgctatcactattatggagacattt
aaagatgagccacatacatttaaagtagaggtaaaacgtactgataaaacatttccttta
gaatctcatgccatccaacgtgagatcggtggctatgttttaccacaatttcaaaattta
tctgttaaagtgaagcagcctgatattgagctacgtgtagaagttcgccatgatgcaact
tatatgatggcacaagtcattcctggtgcaggtggaatgcctgtaggatcaaatggcaag
tctttattaatgctatctggcggtattgatagccctgtcgcaggttatttaatgatgaag
cgtggtgtgcgattagaggcaattcacttctttagtccaccttatacaagccaaaattca
ttggaaaaagttaaggtgcttgccaatgaattaacaaaatttggtgctagtattcgcttg
catgtcattccttttactgaaatacaagttcttattaaagaaaaagtaccttctaatgta
tcgatgacgacaacacgccgaatgatgttgaaggttgctgatcaggtgcgtgaggaaatt
ggtgcacttgctattgtaacgggcgaaagtcttggacaagtggcgagtcaaacgcttgaa
agtttaacagcaataaacgcagtaacaaatacacctatccttcgtccgctgatttcaact
gataaattagagattattgatattgcagaaaaaatcggcacatacgaaacatctattcag
ccatttgaagattgctgcacgatttttacaccagcaagtccaaaaacaaaaccgaagctt
gaaaaggttgagcattatgaaagcttctctgactttgatgaattgatcgagcgagcagtg
aagaatcgcgaggtctatattttccctaagaaagaagaacaacaagataaatttgcagat
ctactataa
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