Lysobacter sp. TY2-98: DWG18_03485
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Entry
DWG18_03485 CDS
T05586
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt00521
Streptomycin biosynthesis
lyt00523
Polyketide sugar unit biosynthesis
lyt00541
O-Antigen nucleotide sugar biosynthesis
lyt01100
Metabolic pathways
lyt01110
Biosynthesis of secondary metabolites
lyt01250
Biosynthesis of nucleotide sugars
Module
lyt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DWG18_03485 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DWG18_03485 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DWG18_03485 (rfbC)
Enzymes [BR:
lyt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DWG18_03485 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXK71448
UniProt:
A0A345ZI73
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All DBs
Position
715445..715999
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AA seq
184 aa
AA seq
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MKLIETDLPGCVIVEPRVFGDDRGFFYESFNLEGFATHGLTPSFVQGNVSSSRRGVLRGL
HYQWPKPQGKFVTVLQGEVWDVAVDIRRGSPTFGRWTGVTLNAENKRHLWIPEGFAHGFV
VTSEAALFSYLCTATYDPAADAAIRWDDPSLAIDWPVSDPSLSGKDAAAPYLGDIALERL
PEFT
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttgatcgagaccgacctgcccggctgcgtgatcgtcgaaccgagggtattcggc
gacgaccgcggattcttctacgagtcgttcaatcttgagggtttcgcaacgcatggcctc
acgccgtcgttcgttcaggggaacgtttcatcgtcgcgccgcggtgtacttcgcggactt
cactatcagtggccgaagccgcagggcaagttcgtgaccgtgctgcagggtgaagtgtgg
gacgtcgccgtagacattcgtcgcggttcgccgacgttcgggcgctggacgggcgtgacg
ctgaacgccgagaacaagcgtcacttgtggattcctgaaggatttgcgcacggcttcgtc
gtgaccagcgaagcggcgttgttctcctacctctgcaccgcgacctacgatccggctgca
gatgccgcgatccgatgggacgacccgagtctggcgatcgattggccggtctcagaccct
tcgctgtcgggcaaggacgctgccgcaccttatcttggcgatattgcgctcgaacggctg
cccgaattcacatga
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