Martelella sp. AD-3: AZF01_01330
Help
Entry
AZF01_01330 CDS
T04332
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
maad
Martelella sp. AD-3
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AZF01_01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_01330
Enzymes [BR:
maad01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AZF01_01330
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AZF01_01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
DNA_primase_S
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AMM83169
UniProt:
A0A127CE96
LinkDB
All DBs
Position
284727..287192
Genome browser
AA seq
821 aa
AA seq
DB search
MAEIDRLAEYVTRRDFSRTGEPGRGTRRKSRKDKLSFVVQKHDASRLHYDFRLEWSGTLL
SWAVTRGPSDDPREKRLAVRTEDHPLDYAGFEGTIPKDQYGGGTVMVWDRGTWEPVGDPE
QGLSEGKLKFCLKGERMNGGWALVRMRGRKGERRENWLLIKERDGMAGDEADHLTGTFET
SVKTGRLLDAIEQDGKPKRTGSKSGSSSGKMPKFRKPELATLYDAVPEGEGWIHETKFDG
YRCIAAVGKGGPRFFTRSGQDWTDKYQALADAFDALEGESLLLDGEIMAADVPKNGSAFS
ALQAALHDGAPLLYYVFDILEHNGRSLTDCPLLERKAVLEEALAPLDLEEGKVRVSAWVE
GNGGDILEKICKAGGEGIVSKKADAPYRHGRTKSWRKVKCGKRQEFVIGGYSPSSKRGRA
FASLLLGQYADDGRLCYRGRAGTGFSADELDRLGGKLKSLSRKTAPFEDVPGAIARDAAW
VTPKLVAEIEFAELTAEGHVRHGAYLGLRGDKEAEEVTPENETRSDATVKGITITHPDRE
LFAKAGVSKLDIARHYGLVGERMVEICGERPVSLLRCPAGIEEECFFQKHAGKGFPDELT
RIAIAEKDGETGEYLYASGAEGYVAAAQMGTIEFHGWAARADRLERPDRMVFDLDPDEKL
GFAETKQAAFDLKSLLSDIGLEAYAMVTGGKGVHLVVPLRRTVGWDTLKSFAKTLAHLMA
EREPDRFTATMSKEKRKGRIFIDWLRNERGATAILPYSVRARPGAPVATPVTWDELKELK
SAAAFGLKDMAERLGQEEPALAVKPQTLAKAVIDKLKRRLG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatcgacagacttgcagaatacgtgacgcgccgcgatttttcgcgaaccggg
gagcctgggcgcggaacccgcaggaaaagccgcaaggacaagctttccttcgtggtgcag
aaacacgatgcctcccgacttcactatgactttcggctggaatggagcggcacgctcttg
agctgggcggtgacgcgcggaccgagcgacgatccgcgggaaaagcggctggcggtgcgc
accgaggaccatccgctcgactatgccggcttcgaaggcacgatcccgaaggaccagtat
ggcggcggcaccgtcatggtctgggaccgcggcacatgggaaccggtcggggaccccgaa
cagggactttccgagggcaaactgaaattctgccttaagggcgaacgcatgaacggcggc
tgggcgctggtgcgcatgcgcggcaggaagggcgaaaggcgcgagaactggctgctgatc
aaggagcgcgacggcatggccggcgacgaggccgatcatctgacgggcacctttgagacc
agcgtcaagaccgggcgcttgctcgacgcgatcgaacaggatgggaagccgaaaaggacc
gggtcgaaatcaggatcttccagcgggaaaatgccgaaattcaggaagcccgaactggcc
acgctctacgacgcggtgccggaaggcgagggctggatccacgaaaccaaatttgacggc
tatcgctgcatagccgccgtgggcaaaggcggaccgcgcttcttcacccgctcgggccag
gactggaccgacaaataccaggcgcttgccgatgcctttgacgcgctggaaggcgagagc
ctgttgctcgacggcgagatcatggcggccgatgttcccaaaaacggctcggccttttcc
gcgttgcaggcggcgcttcatgacggcgcgccgctcctctattatgtgttcgacatcctc
gagcacaatggcaggtcgctgaccgactgcccccttcttgagcgcaaggcggtgcttgag
gaggcgcttgcgccgcttgacctcgaagagggcaaggtgcgggtttcggcctgggtcgag
ggcaatggcggcgacattctcgagaagatctgcaaggccggcggcgagggcatcgtctcc
aagaaggccgatgcgccctatcgccacggccgcacaaaaagctggcgcaaggtcaagtgc
ggcaagcggcaggagttcgtcatcggcggttattcgccctcttcgaaaaggggccgcgcc
ttcgcctcgctgttgctcggacaatatgcggatgacgggcgtctgtgctatcgtggccgc
gccgggacagggttttcggcggatgaactcgaccggctgggcggcaagttgaagagcctt
tcccgcaagaccgctcctttcgaagatgtgccgggggcgatcgcgcgggatgctgcctgg
gttacgccgaaacttgtggcggaaatcgagttcgcggagctgaccgccgaagggcatgtg
cgccacggcgcctatctcggcctgcgcggcgacaaggaggcggaagaggtgacaccggaa
aacgagacgcgcagcgacgccacggtcaagggcatcaccataacccatccggaccgcgaa
ctctttgcgaaggccggggtgagcaaactcgatatcgcccggcattatggtctcgtcggc
gaacgcatggtcgaaatctgcggcgaacgcccggtttcgctgctgcgctgccccgccggg
atcgaggaggagtgctttttccagaagcacgctggcaagggctttcccgatgagctgacc
cgcatcgccattgcggaaaaggacggagagacgggagaatatctctatgcttcgggcgcg
gaaggctatgtcgccgccgcccagatgggcacgatcgagtttcacggctgggcggcgcgc
gccgaccggctggaacgacctgaccggatggtcttcgatctcgatccagacgagaagctc
ggctttgccgaaacgaagcaggcggctttcgacctgaagtccctgctgtccgatatcgga
cttgaggcctatgcgatggtgaccggcggcaagggcgttcaccttgtcgtgccgcttcgg
cgcaccgttggctgggatacgctcaaatccttcgccaaaacgctcgcccatctgatggcc
gagcgcgaaccggaccgcttcacggccaccatgtcgaaggaaaagcgaaaggggcggatc
ttcatcgactggctgcgcaatgaacgcggcgcgaccgcgatcctgccctattccgtccgc
gcccggcccggcgccccggtggccacccccgtcacctgggacgaactgaaggagctgaag
tcggccgccgcctttggcttgaaggacatggccgaacgcctggggcaggaagagccggcg
ctggccgtcaagccgcagacgctcgccaaggcggtgatcgacaagctcaagaggcggctt
ggctga
DBGET
integrated database retrieval system