Mycobacterium tuberculosis variant africanum: MAF_27070
Help
Entry
MAF_27070 CDS
T01575
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SIGA (SIGMA-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
maf
Mycobacterium tuberculosis variant africanum
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MAF_27070 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maf03021
]
MAF_27070 (sigA)
Transcription machinery [BR:
maf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAF_27070 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CCC27777
LinkDB
All DBs
Position
2994406..2995992
Genome browser
AA seq
528 aa
AA seq
DB search
MAATKASTATDEPVKRTATKSPAASASGAKTGAKRTAAKSASGSPPAKRATKPAARSVKP
ASAPQDTTTSTIPKRKTRAAAKSAAAKAPSARGHATKPRAPKDAQHEAATDPEDALDSVE
ELDAEPDLDVEPGEDLDLDAADLNLDDLEDDVAPDADDDLDSGDDEDHEDLEAEAAVAPG
QTADDDEEIAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVAL
LNAEEEVELAKRIEAGLYATQLMTELSERGEKLPAAQRRDMMWICRDGGRAKNHLLEANL
RLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMA
DQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREP
ISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLDTLSEREAGVVRLRFG
LTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccaaagcaagcacggcgaccgatgagccggtaaaacgcaccgccaccaag
tcgcccgcggcttccgcgtccggggccaagaccggcgccaagcgaacagcggcgaagtcc
gctagtggctccccacccgcgaagcgggctaccaagcccgcggcccggtccgtcaagccc
gcctcggcaccccaggacactacgaccagcaccatcccgaaaaggaagacccgcgccgcg
gccaaatccgccgccgcgaaggcaccgtcggcccgcggccacgcgaccaagccacgggcg
cccaaggatgcccagcacgaagccgcaacggatcccgaggacgccctggactccgtcgag
gagctcgacgctgaaccagacctcgacgtcgagcccggcgaggacctcgaccttgacgcc
gccgacctcaacctcgatgacctcgaggacgacgtggcgccggacgccgacgacgacctc
gactcgggcgacgacgaagaccacgaagacctcgaagctgaggcggccgtcgcgcccggc
cagaccgccgatgacgacgaggagatcgctgaacccaccgaaaaggacaaggcctccggt
gatttcgtctgggatgaagacgagtcggaggccctgcgtcaagcacgcaaggacgccgaa
ctcaccgcatccgccgactcggttcgcgcctacctcaaacagatcggcaaggtagcgctg
ctcaacgccgaggaagaggtcgagctagccaagcggatcgaggctggcctgtacgccacg
cagctgatgaccgagcttagcgagcgcggcgaaaagctgcctgccgcccagcgccgcgac
atgatgtggatctgccgcgacggcggtcgcgcgaaaaaccatctgctggaagccaacctg
cgcctggtggtttcgctagccaagcgctacaccggccggggcatggcgtttctcgacctg
atccaggaaggcaacctggggctgatccgcgcggtggagaagttcgactacaccaagggg
tacaagttctccacctacgctacgtggtggattcgccaggccatcacccgcgccatggcc
gaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtgatcaacaagctgggc
cgcattcaacgcgagctgctgcaggacctgggccgcgagcccacgcccgaggagctggcc
aaagagatggacatcaccccggagaaggtgctggaaatccagcaatacgcccgcgagccg
atctcgttggaccagaccatcggcgacgagggcgacagccagcttggcgatttcatcgaa
gacagcgaggcggtggtggccgtcgacgcggtgtccttcactttgctgcaggatcaactg
cagtcggtgctggacacgctctccgagcgtgaggcgggcgtggtgcggctacgcttcggc
cttaccgacggccagccgcgcacccttgacgagatcggccaggtctacggcgtgacccgg
gaacgcatccgccagatcgaatccaagactatgtcgaagttgcgccatccgagccgctca
caggtcctgcgcgactacctggactga
DBGET
integrated database retrieval system